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Job DescriptionP10902
Confidence99.69%DateThu Jan 5 11:32:21 GMT 2012
Rank67Aligned Residues198
% Identity15%Templatec2rgoA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:alpha-glycerophosphate oxidase; PDBTitle: structure of alpha-glycerophosphate oxidase from2 streptococcus sp.: a template for the mitochondrial alpha-3 glycerophosphate dehydrogenase
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30. ........40.........50...... ...60.........70.
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Query Sequence  TLPEHSCDVLIIGSGAAGLSLALRLADQH. QVIVLSKGPVTEGSTFYAQGGIAAV. . FDETDSIDSHVEDTL. . . . . . . .
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Template Sequence  KMQQEELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEGTSSRSTKLVHGGIRYLKTFDVEVVADTVGERAVVQGI
Template Known Secondary structure  S


STTT

SSSTT
SGGGSS
S


GGGGGGT
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   13......20.........30.........40.........50.........60.........70.........80.........90..
 
   72.......80.........90.........100.........110.........120.........130......
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Query Sequence  . . . . . . . . . . . . . . . IAGAGICDRHAVEFVASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSHRRILHAADAT
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Template Sequence  APHIPKPDPMLLPIYEDEGATTFNMFSVKVAMDLYDKLANVTGTKYENYTLTPEEVLEREPFLKKEGLKGAGVYLDFRNN
Template Known Secondary structure 
TTSS

SSSSS
S

TT
TTSTT



TTS

TT



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   93......100.........110.........120.........130.........140.........150.........160.........170..
 
   137..140.........150.........160.........170.........180.........190.........200........
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Query Sequence  GREVETTLVSKALNHPNIRVLERSNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS
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Template Sequence  DARLVIDNIKKAAED. GAYLVSKMKAVGFLYEGD. . . . . . . QIVGVKARDLLTDEVIEIKAKLVINTSGPWV
Template Known Secondary structure  T.T
SSSS.......STTTT

GGG
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   173......180....... ..190.........200..... ....210.........220.........230......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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