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Job DescriptionP10902
Confidence99.58%DateThu Jan 5 11:32:21 GMT 2012
Rank95Aligned Residues243
% Identity23%Templatec2q7vA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:thioredoxin reductase; PDBTitle: crystal structure of deinococcus radiodurans thioredoxin2 reductase
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30. ........40.........50.........60.........70.........80....
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Query Sequence  EHSCDVLIIGSGAAGLSLALRLADQH. QVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAVE
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Template Sequence  AHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPGG. . QIAWSEEVENFPGFPE. . . . . . . . . . . . . . PIAGMELAQ
Template Known Secondary structure 


STT

SS
TTG..GGGG
S
B

STT
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B
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   6...10.........20.........30.........40.... .....50.........60 .........
 
   85....90.........100.........110.........
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Query Sequence  FVASNARSCVQWLIDQGVLFDTHIQPNGEESYHLT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  RMHQQAEKFGAKVEMDEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCATCDGFF
Template Known Secondary structure  TT



TTSSS

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TTTTTTBTTTS
GGG
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   70.........80.........90.........100.........110.........120.........130.........140.........
 
   120.........130.........140.........150.........160.........170.........180
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Query Sequence  . . . . . . . . . . . . . . . . . . . REGGHSHRRILHAADATGREVETTLVSKALNHPNIRVLERSNAVDLIVSDKIGLPGTRRVV
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Template Sequence  YKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRANKVAQARAFANPKMKFIWDTAVEEIQGADS. . . . . . . . VS
Template Known Secondary structure  GTT


STTT
S
SSSS

S
T
TT
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   150.........160.........170.........180.........190.........200.........210......... 220.
 
   181........190.........200.........210.........220.........230.........240.........250.........260
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Query Sequence  GAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVANLEFNQFHPTALYHPQARNFLLTE
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Template Conservation                                  ................................................
Template Sequence  GVKLRNLKTGEVSELATDGVFIFIGHVPNTAF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTT


S
S
S
GG................................................
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   222.......230.........240.........250...
 
   261........270.........280.........290.........300.........310.........320.........330.........340
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Query Sequence  ALRGEGAYLKRPDGTRFMPDFDERGELAPRDIVARAIDHEMKRLGADCMFLDISHKPADFIRQHFPMIYEKLLGLGIDLT
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VKDTVSLR
Template Known Secondary structure  ........................................................................GTTTS
B
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   254.....260.
 
   341........350.........360.........370.........380.........390.........400.........410..
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Query Sequence  QEPVPIVPAAHYTCGGVMVDDHGRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRMPY
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Template Sequence  DD. . . . . . . . . . . . GYVDVRDEIYTNIPMLFAAGDVSDYIYRQ. . . . . . . . LATSVGAGTRAAMMTERQLAA
Template Known Secondary structure  TT............S
B

BTTTB
SSTT
STTT
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   262. ......270.........280.........290.. .......300.........310...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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