Job Description P10902 Confidence 99.44% Date Thu Jan 5 11:32:21 GMT 2012 Rank 128 Aligned Residues 190 % Identity 21% Template c2jbvA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:choline oxidase; PDBTitle: crystal structure of choline oxidase reveals insights into2 the catalytic mechanism Resolution 1.86 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.		.	.	.	.	.	.	.	.	40	.
Predicted Secondary structure																															.			.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.			.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	N	T	L	P	E	H	S	C	D	V	L	I	I	G	S	G	A	A	G	L	S	L	A	L	R	L	A	D	.	Q	H	.	Q	V	I	V	L	S	K	G	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																															.			.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.			.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	E	N	L	S	D	R	E	F	D	Y	I	V	V	G	G	G	S	A	G	A	A	V	A	A	R	L	S	E	D	P	A	V	S	V	A	L	V	E	A	G	P	D	D	R	G	V	P	E	V	L	Q	L	D	R	W	M	E	L	L	E	S	G	Y	D	W	D	Y	P	I	E	P	Q	E	N	G	N	S	F	M
Template Known Secondary structure		G	G	G														S											T	T	S	T	T	S							S	S				T	T						B	G	G	G	G	G	G	G	T	T	S	T	T	B					B				S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
									42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	T	E	G	S	T	F	Y	A	Q	G	G	I	A	A	V	F	D	E	T	D	S	I	D	S	H	V	E	D	T	L	I	A	G	A	G	I	C	D	R	H	A	V	E	F	V	A	S	N	A	R	S	C	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.													.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.
Template Sequence		R	H	A	R	A	K	V	M	G	G	C	S	S	H	N	S	C	I	A	.	.	.	.	.	F	W	A	P	R	E	D	L	D	E	W	E	A	K	Y	G	A	T	G	W	N	A	E	A	A	W	P	L	Y	K	R	L	E	T	N	E	D	A	G	P	D	A	P	H	H	G	D	S	G	P	V	H	L	M	N	V
Template Known Secondary structure						B		S	T	T	G	G	G	G	T	S			B		.	.	.	.	.														T	T			T	T		S															T	T		B	T	T	B	T	T	S		B	S		S
Template Predicted Secondary structure																					.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.						.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
													95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	Q	W	L	I	D	Q	G	V	L	F	D	T	H	I	Q	P	N	G	E	E	S	Y	H	L	T	R	E	G	G	H	S	H	R	R	I	L	H	A	A	D	A	T	G	R	E	V	E	T	T	L	V	S	K	A	L	N	H	P	N	I	R	V	L	E	R	S	N	A	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.
Template Sequence		P	P	K	D	P	T	G	V	A	L	L	D	A	C	E	Q	A	G	I	P	R	A	K	F	N	T	G	T	T	V	V	N	G	A	N	F	F	Q	I	N	R	R	A	D	G	T	R	S	.	.	.	.	.	.	.	S	S	S	V	S	Y	I	H	P	I	V	E	Q	E	N	F	T	L	L	T	G	L	R	A	R
Template Known Secondary structure			S															T	T			B			S	S	S	S	S			S	S									B		T	T	S	B	B		.	.	.	.	.	.	.							T	G	G	G	T	T		T	T						S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.								.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		D	L	I	V	S	D	K	I	G	L	P	G	T	R	R	V	V	G	A	W	V	W	N	R	N	K	E	T	V	E	T	C	H	A	K	A	.	V	V	L	A	T	G	G	A	S
Query Conservation																																						.
Alig confidence										.	.	.	.	.	.																							.
Template Conservation										.	.	.	.	.	.
Template Sequence		Q	L	V	F	D	A	D	R	.	.	.	.	.	.	R	C	T	G	V	D	I	V	D	S	A	F	G	H	T	H	R	L	T	A	R	N	E	V	V	L	S	T	G	A	I	D
Template Known Secondary structure							T	T	S	.	.	.	.	.	.	B								S	S	T	T	S															S
Template Predicted Secondary structure										.	.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.							.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions