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Job DescriptionP10902
Confidence100.00%DateThu Jan 5 11:32:21 GMT 2012
Rank20Aligned Residues357
% Identity20%Templatec2i0zA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:nad(fad)-utilizing dehydrogenases; PDBTitle: crystal structure of a fad binding protein from bacillus2 cereus, a putative nad(fad)-utilizing dehydrogenases
Resolution1.84 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30. ........40.........50.........60.........70.........80......
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Query Sequence  SCDVLIIGSGAAGLSLALRLADQH. QVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAVEFV
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Template Sequence  HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLP. . . . . LDEIVKHIPGNGRFLYSAFS
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S

STT


SSSSS
TGGGT



S
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TBTGGGG
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   2.......10.........20.........30.........40.........50...... ...60.........70......
 
   87..90.........100.........110.........120.........130.........140.........150.........160......
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Query Sequence  ASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNIRVLERSNAVDLI
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Template Sequence  IFNNEDIITFFENLGVKLKEEDHGRMFPVSNKA. . . . . . . . . . . . . . . . . . . QSVVDALLTRLKDLGVKIRTNTPVETIE
Template Known Secondary structure  S
TT


GGGTT

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S

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   77..80.........90.........100......... 110.........120.........130.......
 
   167..170.........180.........190.........200.........210.........220.........230.........240......
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Query Sequence  VSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVANLEFNQFHPT
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Template Sequence  YENG. . . . . . . . . . . . QTKAVILQTGEVLETNHVVIAVGGKS. . . . . . VPQTGSTGDGYAWAEKAGHTITELFPTEVPIL
Template Known Secondary structure  TT............TT


S




SS......SGGGS
SSTT


S

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   138.140. ........150.........160....... ..170.........180.........190.........
 
   247..250.........260.........270.........280.........290...... ...300.........310.........320
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Query Sequence  ALYHPQARNFLLTEALRGEGAYLKRPDGTRFMPDFDERGELAPRDIVARA. . . . . . IDHEMKRLGADCMFLDISHKPADF
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Template Sequence  SNEPFIRDRSLQGLALRD. INLSVLNAIISHKMDMLFTHFGLSGPAALRCSQFVVKALKKFKTNTIQMSIDALPEENSEQ
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TTTTTT
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SSS

S
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   200.........210....... ..220.........230.........240.........250.........260.........270........
 
   321.... ....330.........340... ......350....
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Query Sequence  IRQHF. . . . . . . . . . . . . . . . . . . . . . PMIYEKLLGLGIDLTQEP. . . . . . . . . . . . . . . . . . . . . . . . VPIVPAAHYTC
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Template Sequence  LFQRMLKQMKEDPKKGIKNVLKGYVPERYFLFLLEKNEIDGSEQAGQVSHEKIRALVKDFKEFTVNVNGTQSIEKAFVTG
Template Known Secondary structure  TTSTTSBTTTSS
TT

TTSBGGGS



GGG
SS
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   283......290.........300.........310.........320.........330.........340.........350.........360..
 
   355....360. ........370.........380.........390.........400.........410.
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Query Sequence  GGVMVDD. . . . . HGRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRMP
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Template Sequence  GGVSVKEINPKEMSSKFTNGLYFCGEVLDI. . . . HGYTGGYNITSALVTGRIAGTTAGENAK
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GGGTTTTSSSBT
GGGBS
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   363......370.........380.........390.. .......400.........410.........420
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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