Job Description P10902 Confidence 100.00% Date Thu Jan 5 11:32:21 GMT 2012 Rank 20 Aligned Residues 357 % Identity 20% Template c2i0zA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nad(fad)-utilizing dehydrogenases; PDBTitle: crystal structure of a fad binding protein from bacillus2 cereus, a putative nad(fad)-utilizing dehydrogenases Resolution 1.84 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		S	C	D	V	L	I	I	G	S	G	A	A	G	L	S	L	A	L	R	L	A	D	Q	H	.	Q	V	I	V	L	S	K	G	P	V	T	E	G	S	T	F	Y	A	Q	G	G	I	A	A	V	F	D	E	T	D	S	I	D	S	H	V	E	D	T	L	I	A	G	A	G	I	C	D	R	H	A	V	E	F	V
Query Conservation																										.
Alig confidence																										.																															.	.	.	.	.
Template Conservation																																																									.	.	.	.	.
Template Sequence		H	Y	D	V	I	V	I	G	G	G	P	S	G	L	M	A	A	I	G	A	A	E	E	G	A	N	V	L	L	L	D	K	G	N	K	L	G	R	K	L	A	I	S	G	G	G	R	C	N	V	T	N	R	L	P	.	.	.	.	.	L	D	E	I	V	K	H	I	P	G	N	G	R	F	L	Y	S	A	F	S
Template Known Secondary structure				S							S													T	T								S	S	S	S	S							T	G	G	G	T							S		.	.	.	.	.							T		T	B	T	G	G	G	G
Template Predicted Secondary structure																																																									.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	N	A	R	S	C	V	Q	W	L	I	D	Q	G	V	L	F	D	T	H	I	Q	P	N	G	E	E	S	Y	H	L	T	R	E	G	G	H	S	H	R	R	I	L	H	A	A	D	A	T	G	R	E	V	E	T	T	L	V	S	K	A	L	N	H	P	N	I	R	V	L	E	R	S	N	A	V	D	L	I
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	F	N	N	E	D	I	I	T	F	F	E	N	L	G	V	K	L	K	E	E	D	H	G	R	M	F	P	V	S	N	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	S	V	V	D	A	L	L	T	R	L	K	D	L	G	V	K	I	R	T	N	T	P	V	E	T	I	E
Template Known Secondary structure			S												T	T							G	G	G					T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T						S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.																				110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	D	K	I	G	L	P	G	T	R	R	V	V	G	A	W	V	W	N	R	N	K	E	T	V	E	T	C	H	A	K	A	V	V	L	A	T	G	G	A	S	K	V	Y	Q	Y	T	T	N	P	D	I	S	S	G	D	G	I	A	M	A	W	R	A	G	C	R	V	A	N	L	E	F	N	Q	F	H	P	T
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Template Sequence		Y	E	N	G	.	.	.	.	.	.	.	.	.	.	.	.	Q	T	K	A	V	I	L	Q	T	G	E	V	L	E	T	N	H	V	V	I	A	V	G	G	K	S	.	.	.	.	.	.	V	P	Q	T	G	S	T	G	D	G	Y	A	W	A	E	K	A	G	H	T	I	T	E	L	F	P	T	E	V	P	I	L
Template Known Secondary structure				T	T	.	.	.	.	.	.	.	.	.	.	.	.								T	T							S									S	S	.	.	.	.	.	.	S	G	G	G	S		S	S									T	T										S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Template SS confidence
		138	.	140	.													.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.							.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.							.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																																																				.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.
Query Sequence		A	L	Y	H	P	Q	A	R	N	F	L	L	T	E	A	L	R	G	E	G	A	Y	L	K	R	P	D	G	T	R	F	M	P	D	F	D	E	R	G	E	L	A	P	R	D	I	V	A	R	A	.	.	.	.	.	.	I	D	H	E	M	K	R	L	G	A	D	C	M	F	L	D	I	S	H	K	P	A	D	F
Query Conservation																																																				.	.	.	.	.	.
Alig confidence																				.																																.	.	.	.	.	.
Template Conservation																				.
Template Sequence		S	N	E	P	F	I	R	D	R	S	L	Q	G	L	A	L	R	D	.	I	N	L	S	V	L	N	A	I	I	S	H	K	M	D	M	L	F	T	H	F	G	L	S	G	P	A	A	L	R	C	S	Q	F	V	V	K	A	L	K	K	F	K	T	N	T	I	Q	M	S	I	D	A	L	P	E	E	N	S	E	Q
Template Known Secondary structure									T	T	T	T	T	T						.																				S	S				S																				S								S		T	T	S
Template Predicted Secondary structure																				.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		321	.	.	.	.																							.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.																									.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	R	Q	H	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	M	I	Y	E	K	L	L	G	L	G	I	D	L	T	Q	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	I	V	P	A	A	H	Y	T	C
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	F	Q	R	M	L	K	Q	M	K	E	D	P	K	K	G	I	K	N	V	L	K	G	Y	V	P	E	R	Y	F	L	F	L	L	E	K	N	E	I	D	G	S	E	Q	A	G	Q	V	S	H	E	K	I	R	A	L	V	K	D	F	K	E	F	T	V	N	V	N	G	T	Q	S	I	E	K	A	F	V	T	G
Template Known Secondary structure											T	T	S	T	T	S	B					T	T	T	S	S												T	T			T	T	S	B	G	G	G	S																									G	G	G		S	S
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		355	.	.	.	.	360	.						.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure									.	.	.	.	.
Query SS confidence									.	.	.	.	.
Query Sequence		G	G	V	M	V	D	D	.	.	.	.	.	H	G	R	T	D	V	E	G	L	Y	A	I	G	E	V	S	Y	T	G	L	H	G	A	N	R	M	A	S	N	S	L	L	E	C	L	V	Y	G	W	S	A	A	E	D	I	T	R	R	M	P
Query Conservation									.	.	.	.	.
Alig confidence									.	.	.	.	.																			.	.	.	.
Template Conservation																																.	.	.	.
Template Sequence		G	G	V	S	V	K	E	I	N	P	K	E	M	S	S	K	F	T	N	G	L	Y	F	C	G	E	V	L	D	I	.	.	.	.	H	G	Y	T	G	G	Y	N	I	T	S	A	L	V	T	G	R	I	A	G	T	T	A	G	E	N	A	K
Template Known Secondary structure						G	G	G			T	T	T	T			S	S	S	B	T					G	G	G	B	S		.	.	.	.	B			T	T	T
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.					.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420