Return to main results Retrieve Phyre Job Id

Job DescriptionP10902
Confidence98.45%DateThu Jan 5 11:32:21 GMT 2012
Rank258Aligned Residues36
% Identity36%Templatec2hkoA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:lysine-specific histone demethylase 1; PDBTitle: crystal structure of lsd1
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30. ........40......
Predicted Secondary structure 




.







Query SS confidence 




















.














Query Sequence  VLIIGSGAAGLSLALRLADQH. QVIVLSKGPVTEGST
Query Conservation 




 
 


 

  


 
. 
 



    

 
Alig confidence 




















.














Template Conservation 










 

  
   
  





  
 


 
Template Sequence  VIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRV
Template Known Secondary structure 

BTT

SSSSSBSS
Template Predicted Secondary structure 











Template SS confidence 




































   281........290.........300.........310.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions