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Job DescriptionP10902
Confidence100.00%DateThu Jan 5 11:32:21 GMT 2012
Rank7Aligned Residues467
% Identity37%Templatec2e5vA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:l-aspartate oxidase; PDBTitle: crystal structure of l-aspartate oxidase from2 hyperthermophilic archaeon sulfolobus tokodaii
Resolution2.09 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30. ........40.........50.........60.........70.........80.........
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Query Sequence  VLIIGSGAAGLSLALRLADQH. QVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAVEFVASN
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Template Sequence  IYIIGSGIAGLSAGVALRRAGKKVTLISKRID. GGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTSE
Template Known Secondary structure 

STT


SSTT.
SSGGG

S



STT

TT
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   2.......10.........20.........30... ......40.........50.........60.........70.........80
 
   90.........100.........110.........120.........130.........140.........150.........160.........
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Query Sequence  ARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNIRVLERSNAVDLIVSD
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Template Sequence  AKNVIETFESWGFEFEED. . . . . . . . . . LRLEGGHTKRRVLHRTDETGREIFNFLLKL. AREEGIPIIEDRLVEIRVKD.
Template Known Secondary structure  TT



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B

TT
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   81........90........ .100.........110.........120........ .130.........140........
 
   170.........180.........190.........200.........210.........220.........230.........240.........
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Query Sequence  KIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVANLEFNQFHPTALY
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Template Sequence  . . . . . . . . . . . GKVTGFVTEKRGLVEDVDKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTS
Template Known Secondary structure  ...........TTTT


S




GGGSSSBSS
TT
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TT


TT

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   149150.........160.........170.........180.........190.........200.........210.......
 
   250.........260.........270.........280.........290.........300.........310.........320.........
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Query Sequence  HPQARNFLLTEALRGEGAYLKRPDGTRFMPDFDERGELAPRDIVARAIDHEMKRLGADCMFLDISHKPADFIRQHFPMIY
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Template Sequence  LDGEV. FLLTETLRGEGAQIINENGERFLFNYDKRGELAPRDILSRAIYIEMLK. . GHKVFIDLSKI. . EDFERKFPVVA
Template Known Secondary structure  GGG

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TTT
TT


GGGGT
TTGGGS
..T


TT
..TT
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   218.220.. .......230.........240.........250.........260.........270 .........280. ........290..
 
   330.........340.........350.........360.........370.........380.........390.........400.........
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Query Sequence  EKLLGLGIDLTQEPVPIVPAAHYTCGGVMVDDHGRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRR
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Template Sequence  KYLARHGHNY. KVKIPIFPAAHFVDGGIRVNIRGESNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINLPRYVDSS
Template Known Secondary structure  TT

T.TS

S


TT
B
SSBT
GGG
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TTGGGTTTS
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   293......300.. .......310.........320.........330.........340.........350.........360.........370.
 
   410.........420.........430.........440.........450.........460.........470.........480.........
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Query Sequence  MPYAHDISTLPPWDESRVENPDERVVIQHNWHELRLFMWDYVGIVRTTKRLERALRRITMLQQEIDEYYAHFRVSNNLLE
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Template Sequence  WEGISTDDGIVHSVRISGNKTLS. . . . . . . LKEIRRINWENVGIIRNEEKLVKAINTYSS. . . . . . . . . . . . . . . . . . . S
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TT








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   372.......380.........390.... .....400.........410.........420.... .
 
   490.........500.........510.........520.........530...
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Query Sequence  LRNLVQVAELIVRCAMMRKESRGLHFTLDYPELLTHSGPSILSP
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Template Sequence  TQNEAIISYLTALAAEIRKESRGNHFREDYPYKDPNWEKRIYFK
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S
BTTB
BTTB
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GGG
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   426...430.........440.........450.........460.........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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