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Job DescriptionP10902
Confidence99.74%DateThu Jan 5 11:32:21 GMT 2012
Rank54Aligned Residues260
% Identity18%Templatec1geuA_
PDB info PDB header:oxidoreductase(flavoenzyme)Chain: A: PDB Molecule:glutathione reductase; PDBTitle: anatomy of an engineered nad-binding site
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30. ........40.........50.........60.........70........
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Query Sequence  HSCDVLIIGSGAAGLSLALRLADQH. QVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVEDTLIAGAGIC. . . . . . .
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Template Sequence  KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVNVG. . . . CVPKKVMWHAAQIREAIHMYGPDYGFDTTINK
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STTT

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TTS....TTTGGGT






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   3......10.........20.........30.........40...... ...50.........60.........70........
 
   7980.........90.........100.........110.........
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Query Sequence  . . . . . . DRHAVEFVASNARSCVQWLIDQGVLFDTHIQPNGEESYHLT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Conservation                                                                                  
Template Sequence  FNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEVNGETITADHILIATGGRPSHPDIPGVEYGIDSD
Template Known Secondary structure 

TT
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TTTT






STTGGGSB
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   7980.........90.........100.........110.........120.........130.........140.........150........
 
   120.........130.........140.........150.........160.........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . REGGHSHRRILHAADATGREVETTLVSKALNHPNIRVLERSNAVDLIVSD
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Template Sequence  GFFALPALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNT
Template Known Secondary structure  T
SS

S

STT

SSSSSSTTS



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T
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   159160.........170.........180.........190.........200.........210.........220.........230........
 
   170.........180.........190.........200.........210.........220.........230.........240.........
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Query Sequence  KIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGDGIAMAWRAGCRVANLEFNQFHPTALY
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Template Sequence  D. . . . . . . . . . GSLTLELEDGRS. . ETVDCLIWAIG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T..........S
TTS
..S
S
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   239 240.........250. ........260..
 
   250.........260.........270.........280.........290.........300.........310.........320.........
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Query Sequence  HPQARNFLLTEALRGEGAYLKRPDGTRFMPDFDERGELAPRDIVARAIDHEMKRLGADCMFLDISHKPADFIRQHFPMIY
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   330.........340... ......350.........360.........370.........380.........390.........400.......
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Query Sequence  EKLLGLGIDLTQEP. . VPIVPAAHYTCGGVMVDDHGRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDIT
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Template Sequence  . . . . . . . REPANDNINLEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNTGAVEL. . . . . . . . . TPVAVAAGRRLSERLF
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STT
T

B
TTS
B


TTSB
SSTT
GGGGTS


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   263......270.........280.........290.........300.........310 .........320......
 
   408.410.........420..
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Query Sequence  RRMPYAHDISTLPPW
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Template Conservation                 
Template Sequence  NNKPDEHLDYSNIPT
Template Known Secondary structure  TT
TT




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   327..330.........340.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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