|   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | K | G | G | L | R | R | R | D | L | P | A | D | P | L | T | L | F | E | R | W | L | S | Q | A | C | E | A | K | L | A | D | P | T | A | M | V | V | A | T | V | D | E | H | G | Q | P | Y | Q | R | I | V | L | L | K | H | Y | D | E | K | G | M | V | F | Y | T | N | L | G | S | R | K | A | H | Q | I | E | N | N | P |
Query Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|   |
|   |   |
|
|
|
|   |   |
|
|   |
|   |   |
|   |
|   |
|
|   |   |
|   |   |   |   |   |
|   |
|   |   |   |
|   |
|   |   |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|
|   |   |
|
|   |
|   |   |
|   |
|   |   |
|   |   |
|   |   |   |
|   |
|   |
|   |   |   |
|   |
|   |   |   |
|   |   |
|
|
Template Sequence |   |
E | A | P | F | P | E | F | E | A | P | P | A | N | P | M | E | V | L | R | N | W | L | E | R | A | R | R | Y | G | V | R | E | P | R | A | L | A | L | A | T | V | D | G | Q | G | R | P | S | T | R | I | V | V | I | A | E | L | G | E | R | G | V | V | F | A | T | H | A | D | S | Q | K | G | R | E | L | A | Q | N | P |
Template Known Secondary structure |   |
|
|
|
| T | T | T | T | S |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S | S | T | T |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |
|
|  |  |
| S | S |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
  |
  |   |
98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | V | S | L | L | F | P | W | H | T | L | E | R | Q | V | M | V | I | G | K | A | E | R | L | S | T | L | E | V | M | K | Y | F | H | S | R | P | R | D | S | Q | I | G | A | W | V | S | K | Q | S | S | R | I | S | A | R | G | I | L | E | S | K | F | L | E | L | K | Q | K | F | Q | Q | G | E | V | P | L | P | S | F |
Query Conservation |   |
  |   |
|
|   |
|   |   |   |   |   |   |
|
|
|
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|   |
|
|   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|   |   |   |   |   |   |   |
|
|
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |
|   |
|   |   |
Template Sequence |   |
W | A | S | G | V | L | Y | W | R | E | S | S | Q | Q | I | I | L | N | G | R | A | E | R | L | P | D | E | R | A | D | A | Q | W | L | S | R | P | Y | Q | T | H | P | M | S | I | A | S | R | Q | S | E | T | L | A | D | I | H | A | L | R | A | E | A | R | R | L | A | E | . |
. |
T | D | G | P | L | P | R | P | P | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  | S |
| G | G | G |  |  |  |  |  |  |
|
| T | T | S |
|
| S |
|  |  |  |  |  |  |  |  |  |  |  | T | T | . | . | S |
| S |
|
|
|
|
| T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | |
|
. | . | . | . | . | . | 170 | . | . | . |
  |
  |   |
178 | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | G | G | F | R | V | S | L | E | Q | I | E | F | W | Q | G | G | E | H | R | L | H | D | R | F | L | Y | Q | R | E | N | D | A | W | K | I | D | R | L | A | P |
Query Conservation |   |
|   |   |   |   |
|   |
|   |   |
|
|
|
|
|   |   |   |   |
|   |
|   |
|   |   |
|   |
|   |   |   |   |
|   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|   |
|   |   |
|
|
|   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |
|
Template Sequence |   |
Y | C | L | F | E | L | C | L | E | S | V | E | F | W | G | N | G | T | E | R | L | H | E | R | L | R | Y | D | R | D | E | G | G | W | K | H | R | Y | L | Q | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |
| S | S | S |  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
174 | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . |
  |