 |
Job Description | P0AFI7 | Confidence | 99.42% | Date | Thu Jan 5 11:26:27 GMT 2012 |
Rank | 32 | Aligned Residues | 84 |
% Identity | 18% | Template | d1flma_ |
SCOP info | Split barrel-like
| FMN-binding split barrel
| PNP-oxidase like
|
Resolution | 1.30 |
|
 |
  |   |
39 | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
|
|
. | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
. |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
Query Sequence |   |
L | S | Q | A | C | E | A | K | L | A | D | P | T | A | M | V | V | A | T | V | D | E | H | G | Q | P | Y | Q | R | I | V | L | . |
. |
. |
L | K | H | Y | D | E | K | G | M | V | F | Y | T | N | L | G | S | R | K | A | H | Q | I | E | N | N | P | R | V | S | L | L | F | P | W | H | T | L | . |
. |
. |
. |
. |
. |
E |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|
|   |
|   |   |
|
|
|
|   |   |
|
|   |
|   |   |
|   |
|   | . | . | . |
|
|   |   |
|   |   |   |   |   |
|   |
|   |   |   |
|   |
|   |   |   |
|   |   |
|
|   |   |
|
|   |
|   |   |   |   |   | . | . | . | . | . | . |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
Template Conservation |   |
|   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|   |   |   |
|
| . |
|   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|
|   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
L | P | G | T | F | F | E | V | L | K | N | E | G | V | V | A | I | A | T | Q | G | E | D | G | . |
P | H | L | V | N | T | W | N | S | Y | L | K | V | L | D | G | N | R | I | V | V | P | V | G | G | M | H | K | T | E | A | N | V | A | R | D | E | R | V | L | M | T | L | G | S | R | K | V | A | G | R | N | G | P | G |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  | T | S |
|
|  |  |  |  |  |  |  |
| S | S | S | . |  |  |  |  |  |  |  | G | G | G |
|  |  |  | T | T | T |  |  |  |  |  |  | S | S |
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
| . |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | Q | V | M | V | I | G | K | A | E | R | L | S | T |
Query Conservation |   |
|
|
|
|
|   |
|   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|   |
|   |
|   |   |
|
Template Sequence |   |
T | G | F | L | I | R | G | S | A | A | F | R | T | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | S | S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|