Job Description P0AFI7 Confidence 99.80% Date Thu Jan 5 11:26:27 GMT 2012 Rank 21 Aligned Residues 122 % Identity 19% Template c3db0B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:lin2891 protein; PDBTitle: crystal structure of putative pyridoxamine 5'-phosphate oxidase2 (np_472219.1) from listeria innocua at 2.00 a resolution Resolution 2.00 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		L	S	Q	A	C	E	A	K	L	A	D	P	T	A	M	V	V	A	T	V	D	E	H	G	Q	P	Y	Q	R	I	V	L	L	K	H	Y	D	E	K	G	M	V	F	Y	T	N	L	G	S	R	K	A	H	Q	I	E	N	N	P	R	V	S	L	L	F	.	P	W	H	T	L	E	R	Q	V	M	V	I	G	K
Query Conservation																																																																			.
Alig confidence																							.												.																																.
Template Conservation																							.												.
Template Sequence		L	E	D	K	I	L	A	I	L	E	Q	H	Q	V	G	V	L	T	S	V	Q	.	G	D	F	P	H	A	R	Y	X	T	F	.	L	H	D	G	L	T	L	Y	T	P	S	G	K	E	L	P	K	T	E	E	V	R	R	N	P	H	V	C	V	L	I	G	Y	D	S	P	G	S	A	F	L	E	I	N	G	L
Template Known Secondary structure																							.	T	T										.				T	T								T	T	S																				S	T	T
Template Predicted Secondary structure																							.												.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	R	L	S	T	L	E	V	M	K	Y	F	H	S	R	P	R	D	S	Q	I	G	A	W	V	S	K	Q	S	S	R	I	S	A	R	G	I	L	E	S	K	F	L	E	L	K	Q	K	F	Q	Q	G	E	V	P	L	P	S	F	W	G	G	F	R	V	S	L	E	Q	I	E	F	W	Q	G
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Sequence		A	S	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	E	S	I	K	E	R	I	W	E	N	I	S	K	D	W	F	Q	G	.	.	E	D	S	P	S	F	V	V	I	K	I	V	P	E	Q	I	R	I	L	N	S
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T	T	T		S	S	.	.				T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template SS confidence
		83	.	.	.																														.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions