 |
Job Description | P16926 | Confidence | 57.31% | Date | Thu Jan 5 11:35:56 GMT 2012 |
Rank | 27 | Aligned Residues | 33 |
% Identity | 30% | Template | c2w6aB_ |
PDB info |
PDB header:signaling protein | Chain: B: PDB Molecule:arf gtpase-activating protein git1; |
PDBTitle: x-ray structure of the dimeric git1 coiled-coil domain
|
Resolution | 1.40 Å |
|
  |   |
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | D | Q | L | E | L | E | N | R | A | L | R | Q | E | L | L | L | K | N | S | E | L | L | M | L | G | Q | Y | K | Q | E | N | A | R | L | R |
Query Conservation |   |
  |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|   |   |
|
|   |
|
|
|   |
|
|   | . | . | . |   |
|   |   |
|
|   |
|
|   |   |
|
|
Template Sequence |   |
V | Q | Q | L | M | K | V | N | S | S | L | S | D | E | L | R | K | L | Q | R | . |
. |
. |
E | I | H | K | L | Q | A | E | N | L | Q | L | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
449 | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | |
|
|
. | 470 | . | . | . | . | . | . | . | . | . | 480 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|