Job Description Q46868 Confidence 8.88% Date Thu Jan 5 12:35:27 GMT 2012 Rank 91 Aligned Residues 59 % Identity 22% Template c3m0dC_ PDB info PDB header:signaling protein Chain: C: PDB Molecule:tnf receptor-associated factor 1; PDBTitle: crystal structure of the traf1:traf2:ciap2 complex Resolution 2.80 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	I	E	Q	I	A	R	Q	V	H	E	S	M	P	K	G	I	R	E	F	G	E	D	V	E	K	K	I	R	Q	T	L	Q	A	Q	L	T	R	L	D	L	V	S	R	E	E	F	D	V	Q	T	Q	V	L	L	R	T	R	E	K	L	A	L	L	E	Q	R	I	S	E	L	E	N	R	S
Query Conservation
Alig confidence															.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	L	A	E	L	E	G	K	L	R	V	F	.	E	N	I	V	A	V	L	N	K	E	V	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	H	L	A	L	A	T	S	I	H	Q	S	Q	L	D	R	E	R	I	L	S	L	E	Q	R	V	V	E	L	Q	Q	T	L
Template Known Secondary structure															.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																T
Template Predicted Secondary structure															.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.																	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions