Job Description Q46868 Confidence 53.43% Date Thu Jan 5 12:35:27 GMT 2012 Rank 8 Aligned Residues 32 % Identity 19% Template c1qceB_ PDB info PDB header:viral protein Chain: B: PDB Molecule:protein (gp41); PDBTitle: solution nmr structure of ectodomain of siv gp41,2 restrained regularized mean structure plus 29 simulated3 annealing structures Resolution UNK

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	V	Q	T	Q	V	L	L	R	T	R	E	K	L	A	L	L	E	Q	R	I	S	E	L	E	N	R	S	T	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	R	Q	Q	E	L	L	R	L	T	V	W	G	T	K	N	L	Q	T	R	V	T	A	I	E	K	Y	L	K	D	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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