Job Description P28721 Confidence 1.97% Date Thu Jan 5 11:45:12 GMT 2012 Rank 74 Aligned Residues 83 % Identity 14% Template d2tbvc_ SCOP info Nucleoplasmin-like/VP (viral coat and capsid proteins) Positive stranded ssRNA viruses Tombusviridae-like VP Resolution 2.90

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	G	G	I	V	D	Y	G	K	H	H	N	S	A	L	N	P	T	G	K	S	N	K	L	V	Q	L	G	R	K	N	S	T	L	N	I	T	C	T	A	P	T	L	I	A	V	T	S	K	D	N	R	Q	S	T	I	V	A	L	N	D	T	S	Y	I	E	K	A	Y	D	T	L	V	D	M	K	G	T	K
Query Conservation
Alig confidence																								.	.	.	.
Template Conservation																								.	.	.	.
Template Sequence		V	D	Q	K	L	I	D	L	G	Q	L	G	I	A	T	Y	G	G	A	G	A	D	.	.	.	.	A	V	G	E	L	F	L	A	R	S	V	T	L	Y	F	P	Q	P	T	N	T	L	L	S	S	K	R	L	D	L	T	G	S	L	A	D	A	T	G	P	G	Y	L	V	L	T	R	T	P	T	V	L	T	H
Template Known Secondary structure		S		T	T	T	T											S		S	S	S		.	.	.	.															S			S								B		B		S	S	S	S				B		S			S							T	T
Template Predicted Secondary structure																								.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250					.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		129	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	F	G	L	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	F	R	A	T	G	T
Template Known Secondary structure				S	S
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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