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Job DescriptionP28721
Confidence96.14%DateThu Jan 5 11:45:12 GMT 2012
Rank6Aligned Residues119
% Identity15%Templatec2w07B_
PDB info PDB header:cell adhesionChain: B: PDB Molecule:minor pilin subunit papf; PDBTitle: structural determinants of polymerization reactivity of the2 p pilus adaptor subunit papf
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3940.........50.........60.........70.........80.........90.........100.........110........
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Query Sequence  YTPGACTPVVTGGGIVDYGKHHNSALNPTGKSNKLVQLGRKNSTLNITCTAPTLIAVTSKDNRQSTIVALNDTSYIEKAY
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Template Sequence  VYIPPCTINNGQNIVVDFGNINPEHVDNSRGE. . . . . . . . VTKTISISCPYGS. LWIKVTGNTMGGGQNNVLATNITHFG
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   10.........20.........30.........40. ........50.... .....60.........70.........80
 
   119120.........130.........140.........150.........160.........170.
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Query Sequence  DTLVDMKGTKNAFGLGSAPNGQKIGAASIGIDRSNGGIHAADDTGEIPVDLIQ
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Template Sequence  IALYQGKGMSTPL. . . . . TLRSTFTFTSVPFRNGSGILNGGDFRTTASMSMIY
Template Known Secondary structure  SSSSSSB
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   83......90..... ....100.........110.........120.........130
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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