 |
| Job Description | P28721 | | Confidence | 1.67% | Date | Thu Jan 5 11:45:12 GMT 2012 |
| Rank | 89 | Aligned Residues | 24 |
| % Identity | 38% | Template | c2ariA_ |
| PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:envelope polyprotein gp160; |
PDBTitle: solution structure of micelle-bound fusion domain of hiv-12 gp41
|
| Resolution | UNK |
|
| | |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . |
| Predicted Secondary structure | |
 | | | | | | | | | |
|
|
|
|
|
|
|
|
|
|  | | | | |  |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
A | I | C | A | A | L | S | V | A | A | F | S | A | M | A | T | D | S | T | D | T | E | L | T | I | I |
| Query Conservation | |
|
| | | | | | | |
| |
| | |
|
|
| | |
|
| |
|
|
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
| Template Conservation | |
| |
|
|
|
|
| |
|
|
|
|
|
|
|
|
|
| | | . | . |
|
|
|
|
| Template Sequence | |
A | L | F | L | G | F | L | G | A | A | G | S | T | M | G | A | A | S | M | T | . |
. |
L | T | V | Q |
| Template Known Secondary structure | |
| | | | | | | | | | | | | | T | T | T | S |
| S | . | . | S | S |
|
|
| Template Predicted Secondary structure | |
| | | | | | | |
|
|
|
|
|
|
|
| | | | | . | . | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | |
|
. | . | . | 30 |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
