Job Description P31801 Confidence 24.22% Date Thu Jan 5 11:48:41 GMT 2012 Rank 2 Aligned Residues 139 % Identity 9% Template c3rkoM_ PDB info PDB header:oxidoreductase Chain: M: PDB Molecule:nadh-quinone oxidoreductase subunit m; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170														.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	M	I	V	T	G	G	L	V	G	F	S	L	L	L	G	G	R	K	F	A	T	Q	Y	M	N	L	F	G	I	K	Q	Y	L	I	A	L	F	P	L	A	I	I	V	L	V	F	P	M	A	L	P	A	A	N	F	S	T	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	L	V	A	L	I
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	I	A	H	G	L	S	A	A	G	L	F	I	L	C	G	Q	L	Y	E	R	I	H	T	R	D	M	R	M	M	G	G	L	W	S	K	M	K	W	L	P	A	L	S	L	F	F	A	V	A	T	L	G	M	P	G	T	G	N	F	V	G	E	F	M	I	L	F	G	S	F	Q	V	V	P	V	I	T	V	I
Template Known Secondary structure																											B	G	G	G			S	G	G	G	T		S	S													S			T	T	S
Template Predicted Secondary structure
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	A	M	Y	G	V	F	L	L	I	Q	T	K	T	H	Q	S	L	F	V	Y	E	H	E	D	D	S	D	D	D	D	P	H	H	G	K	P	S	A	H	S	S	L	W	H	A	I	W	L	I	I	H	L	I	A	V	I	A	V	T	K	M	N	A	S	S	L	E	T	L	L	D	S	M
Query Conservation
Alig confidence																																	.	.	.
Template Conservation																																	.	.	.
Template Sequence		S	T	F	G	L	V	F	A	S	V	Y	S	L	A	M	L	H	R	A	Y	F	G	K	A	K	S	Q	I	A	S	Q	.	.	.	E	L	P	G	M	S	L	R	E	L	F	M	I	L	L	L	V	V	L	L	V	L	L	G	F	Y	P	Q	P	I	L	D	T	S	H	S	A	I	G	N	I
Template Known Secondary structure																						S	S	S	S		S	S	T	T		S	.	.	.	S
Template Predicted Secondary structure																																	.	.	.
Template SS confidence
		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.				.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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