Job Description P31801 Confidence 2.11% Date Thu Jan 5 11:48:41 GMT 2012 Rank 36 Aligned Residues 190 % Identity 11% Template c3b9yA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter family rh-like protein; PDBTitle: crystal structure of the nitrosomonas europaea rh protein Resolution 1.85 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	F	P	V	L	A	L	V	V	L	F	L	W	G	S	S	Q	T	L	P	V	V	I	A	I	N	L	L	A	L	I	G	I	L	S	S	A	F	S	V	V	R	H	A	D	V	L	A	H	R	L	G	E	P	Y	G	S	L	I	L	S	L	S	V	V	I	L	E	V	S	L	I	S	A	L	M	A	T	G
Query Conservation
Alig confidence																																								.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Sequence		L	W	L	F	W	P	S	F	A	T	A	I	V	P	F	E	Q	M	P	Q	T	I	V	N	T	L	L	A	L	C	G	A	T	L	A	T	Y	F	.	.	.	.	.	.	L	S	A	L	F	H	K	G	K	A	S	I	V	D	M	A	N	A	A	L	A	G	G	V	A	.	.	.	.	.	.	.	I	G	S	V
Template Known Secondary structure												T	T	S		G	G	G																						.	.	.	.	.	.						T	T	T											T	T						.	.	.	.	.	.	.		T	T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.																										.	.	.	.	.	.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.							.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.								.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	A	P	T	L	M	R	D	T	L	Y	S	I	I	M	I	V	T	G	G	L	V	G	F	S	L	L	L	G	G	R	K	F	A	T	Q	Y	M	N	L	F	G	I	K	Q	Y	L	I	A	L	F	P	L	A	I	I	V	L	V	F	P	M	A	L	P	A	A	N	F	S	T	G	Q	A	L	L	V	A	L
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		C	N	I	V	G	.	P	V	G	A	F	V	I	G	L	L	G	G	A	I	S	V	V	G	F	V	F	I	Q	P	M	L	E	S	K	A	K	T	I	D	T	C	G	V	H	N	L	H	G	L	P	G	L	L	G	G	F	S	A	I	L	I	V	P	G	I	A	V	A	Q	L	T	G	I	G	I	T	L	A	L
Template Known Secondary structure		T	T	T	S		.																					T									S					T	T						T	T														S	T	T
Template Predicted Secondary structure							.
Template SS confidence
		278	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	A	A	M	Y	G	V	F	L	L	I	Q	T	K	T	H	Q	S	L	F	V	Y	E	H	E	D	D	S	D	D	D	D	P	H	H	G	K	P	S	A	H	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	I	G	G	V	I	A	G	A	L	I	K	L	T	G	T	T	K	Q	A	Y	E	D	S	H	E	F	I	H	L	A	G	P	E	D	E	H	K	A	E	R	L	V
Template Known Secondary structure															T	T				S	S	T	T		G	G	G	T	S	S	S				G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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