Job Description P31801 Confidence 2.22% Date Thu Jan 5 11:48:41 GMT 2012 Rank 33 Aligned Residues 91 % Identity 7% Template c2akhZ_ PDB info PDB header:protein transport Chain: Z: PDB Molecule:preprotein translocase sece subunit; PDBTitle: normal mode-based flexible fitted coordinates of a non-2 translocating secyeg protein-conducting channel into the3 cryo-em map of a secyeg-nascent chain-70s ribosome complex4 from e. coli Resolution 14.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	L	A	I	I	V	L	V	F	P	M	A	L	P	A	A	N	F	S	T	G	Q	A	L	L	V	A	L	I	S	A	A	M	Y	G	V	F	L	L	I	Q	T	K	T	H	Q	S	L	F	V	Y	E	H	E	D	D	S	D	D	D	D	P	H	H	G	K	P	S	A	H	S	S	L	W	H	A	I	W	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	V	V	A	L	L	L	V	A	I	V	G	N	Y	L	Y	R	D	I	M	L	P	L	R	A	L	A	V	V	I	L	I	A	A	A	G	G	V	A	L	L	T	T	K	G	K	A	T	V	A	F	A	R	E	A	R	T	E	V	R	K	V	I	W	P	T	R	Q	E	T	L	H	T	T	L	I	V	A	A
Template Known Secondary structure														G	G	G	T	S	S	S	S	S	S					T	T					G	G	G					T	T	S								S	S		S	T											T	T						S	G	G	G	G	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		228	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	H	L	I	A	V	I	A	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	A	V	M	S	L	I	L	W	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions