 |
Job Description | P76204 | Confidence | 40.50% | Date | Thu Jan 5 12:20:28 GMT 2012 |
Rank | 177 | Aligned Residues | 67 |
% Identity | 7% | Template | d1i4na_ |
SCOP info | TIM beta/alpha-barrel
| Ribulose-phoshate binding barrel
| Tryptophan biosynthesis enzymes
|
Resolution | 2.50 |
|
 |
  |   |
143 | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | |
. | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Query Sequence |   |
N | L | G | A | G | N | S | T | M | K | A | V | F | D | G | L | F | T | R | V | M | L | D | K | S | F | I | Q | Q | Q | I | T | H | R | S | F | E | P | F | I | R | A | I | Q | A | Q | I | S | P | C | C | N | C | I | I | A | G | G | I | D | T | A | E | I | L | A | Q | I | T | P | F | . |
D | F | H | A | L |
Query Conservation |   |
|
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |
| . |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |   |   |
|
|   |
|
|   |   |   |
|
|
|   |
|
|
|
|   |   |   |
|   |   |
|   | . | . | . | . | . | . | . | . |
|   |   |
|   |   |   |
|   |   |
|
|
|   |   |
|
|
| . |
|   |   |   |   |
|   |   |
|
|   |   |   |   |
|   |   |
|
|
Template Sequence |   |
D | F | Y | I | D | T | V | Q | V | K | L | A | S | S | V | G | A | D | A | I | L | I | I | A | R | I | L | T | A | E | Q | . |
. |
. |
. |
. |
. |
. |
. |
I | K | E | I | Y | E | A | A | E | E | L | G | M | D | S | L | V | E | . |
V | H | S | R | E | D | L | E | K | V | F | S | V | I | R | P | K | I | I |
Template Known Secondary structure |   |
|
|
|
| S | T |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  | G | G | G | S |
|  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  | . |  |
| S |  |  |  |  |  |  |  |  | T | T |
|
|
| S |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | |
. | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|