Job Description P76204 Confidence 100.00% Date Thu Jan 5 12:20:28 GMT 2012 Rank 2 Aligned Residues 233 % Identity 14% Template c3s83A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ggdef family protein; PDBTitle: crystal structure of eal domain from caulobacter crescentus cb15 Resolution 1.34 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		M	K	I	F	L	E	N	L	Y	H	S	D	C	Y	F	L	P	I	R	D	N	.	Q	Q	V	L	V	G	V	E	L	I	T	H	F	S	S	E	D	G	T	V	R	I	P	T	S	R	V	I	A	Q	L	T	E	E	Q	H	W	Q	L	F	S	E	Q	L	E	L	L	K	S	C	Q	H	F	F	I	Q	H	K
Query Conservation																							.
Alig confidence										.													.
Template Conservation										.
Template Sequence		L	R	G	A	I	G	R	G	.	E	I	T	P	Y	F	Q	P	I	V	R	L	S	T	G	A	L	S	G	F	E	A	L	A	R	W	I	H	P	R	R	G	X	L	P	P	D	E	F	L	P	L	I	E	E	X	G	L	X	S	E	L	G	A	H	X	X	H	A	A	A	Q	Q	L	S	T	W	R	A	A	H
Template Known Secondary structure									T	.	S											T	T	T															T	T	T					G	G	G	T							T	T
Template Predicted Secondary structure										.
Template SS confidence
		295	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
		80						.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.																														.	.	.	.																											.
Query SS confidence			.	.	.	.	.																														.	.	.	.																											.
Query Sequence		L	.	.	.	.	.	F	A	W	L	N	L	T	P	Q	V	A	T	L	L	L	E	R	D	N	Y	A	G	E	L	L	K	Y	P	F	.	.	.	.	I	E	L	L	I	N	E	N	Y	P	H	L	N	E	G	K	D	N	R	G	L	L	S	L	S	Q	.	V	Y	P	L	V	L	G	N	L	G	A	G	N	S
Query Conservation			.	.	.	.	.																														.	.	.	.																											.
Alig confidence			.	.	.	.	.																														.	.	.	.																											.													.	.
Template Conservation																																																																																.	.
Template Sequence		P	A	X	G	N	L	T	V	S	V	N	L	S	T	G	E	I	D	R	P	G	L	V	A	D	V	A	E	T	L	R	V	N	R	L	P	R	G	A	L	K	L	E	V	T	E	S	D	I	X	R	D	P	E	R	A	A	V	I	L	K	T	L	R	D	A	G	A	G	L	A	L	D	D	F	F	S	S	.	.
Template Known Secondary structure		T	T												T	T	G	G	G	S	T	T												T	T			T	T	S																												T												.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		T	M	K	A	V	F	D	G	L	F	T	R	V	M	L	D	K	S	F	I	Q	Q	Q	I	T	H	R	S	F	E	P	F	I	R	A	I	Q	A	Q	I	S	P	C	C	N	C	I	I	A	G	G	I	D	T	A	E	I	L	A	Q	I	T	P	F	D	F	H	A	L	Q	G	C	L	W	.	P	A	V	P	I
Query Conservation																																																																												.
Alig confidence		.																																																																										.
Template Conservation		.
Template Sequence		.	L	S	Y	L	T	R	L	P	F	D	T	L	K	I	D	R	Y	F	V	R	T	X	G	N	N	A	G	S	A	K	I	V	R	S	V	V	K	L	G	Q	D	L	D	L	E	V	V	A	E	G	V	E	N	A	E	X	A	H	A	L	Q	S	L	G	C	D	Y	G	Q	G	F	G	Y	A	P	A	L	S	P
Template Known Secondary structure		.							S															T	T	T																		T	T										S											T						B	T	T	T	B			B
Template Predicted Secondary structure		.
Template SS confidence
			455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
		229	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	I	T	T	L	V	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	E	A	E	V	Y	L	N	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		534	.	.	.	.	.	540	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions