Return to main results Retrieve Phyre Job Id

Job DescriptionP76204
Confidence100.00%DateThu Jan 5 12:20:28 GMT 2012
Rank4Aligned Residues215
% Identity17%Templatec3pjwA_
PDB info PDB header:lyaseChain: A: PDB Molecule:cyclic dimeric gmp binding protein; PDBTitle: structure of pseudomonas fluorescence lapd ggdef-eal dual domain, i23
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  HSDCYFLPIRDN. QQV. LVGVELITHFSSEDGTVRIPTSRVIAQLTEEQHWQLFSEQLELLKSCQHFFIQHKLFAWLNLT
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Template Sequence  RFELFFQPVVAAQDTQLVLHYKVLSRLLDEQGQTIPAGRFLPWLERFGWTARLDRLMLERVLEQMA. . . GHEESLALNLS
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   425....430.........440.........450.........460.........470.........480.........490 .........500.
 
   88.90.........100......... 110.........120.........130..... ....140.........150.........160..
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Query Sequence  PQVATLLLERDNYAGELLKYPF. . . . IELLINENYPHLNEGKDNRGLLSLSQ. VYPLVLGNLGAGNSTMKAVFDGLFTRV
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Template Sequence  SATLADPQALNKVFEILRAHSNLGARLTLEIGEE. QLPEQAVLEQLTRRLRELGFSLSLQRFGGRFSMIGNLARLGLAYL
Template Known Secondary structure  SSTGGGTTT
GG.G


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Query Sequence  MLDKSFIQQQITHRSFEPFIRAIQAQISPCCNCIIAGGIDTAEILAQITPFDFHALQGCLW. PAVPI
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Template Sequence  KIDGSYIRAIDQESDKRLFIEAIQRAAHSIDLPLIAERVETEGELSVIREMGLYGVQGQLFGEPKPW
Template Known Secondary structure 
TTTTTTTTT
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   581........590.........600.........610.........620.........630.........640.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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