Return to main results Retrieve Phyre Job Id

Job DescriptionP76204
Confidence93.97%DateThu Jan 5 12:20:28 GMT 2012
Rank12Aligned Residues109
% Identity9%Templatec3khtA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:response regulator; PDBTitle: crystal structure of response regulator from hahella chejuensis
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   120.........130..... ....140.........150.........160.........170.........180.........190........
Predicted Secondary structure 

.
























Query SS confidence 















.






























































Query Sequence  HLNEGKDNRGLLSLSQ. VYPLVLGNLGAGNSTMKAVFDGLFTRVMLDKSFIQQQITHRSFEPFIRAIQAQISPCCNCIIA
Query Conservation            
  
  .
  






        
  
  
 



   
            
  
   
      


Alig confidence 















.
































.....
























Template Conservation 

           
   
    
  
    


  
     



 
  
.....
   
      

       
 

 
Template Sequence  EDNPDDIALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGL. . . . . PIANGFEVXSAVRKPGANQHTPIVI
Template Known Secondary structure 


TT

SSTT


S
TT
.....GGG
SSSTTTT

Template Predicted Secondary structure 


















.....










Template SS confidence 















































































   21........30.........40.........50.........60.........70 .........80.........90.....
 
   199200.........210.........220...... ...230......
Predicted Secondary structure  .













.

Query SS confidence  .



























.









Query Sequence  . GGIDTAEILAQITPFDFHALQGCLWPAV. PINQITTLVQ
Query Conservation  .



       
  

    


 
 
 .    
     
Alig confidence  .

















...






.









Template Conservation   
              
  ...  
 

      
   
 
Template Sequence  LTDNVSDDRAKQCXAAGAS. . . SVVDKSSNNVTDFYGRIY
Template Known Secondary structure  TT

TT
S...

TTS
Template Predicted Secondary structure 







...




Template SS confidence 







































   96...100.........110.... .....120.........130..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions