Job Description P76204 Confidence 100.00% Date Thu Jan 5 12:20:28 GMT 2012 Rank 1 Aligned Residues 230 % Identity 12% Template c3hvbB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:protein fimx; PDBTitle: crystal structure of the dual-domain ggdef-eal module of2 fimx from pseudomonas aeruginosa Resolution 2.99 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																							.																																																									.	.
Query SS confidence																							.																																																									.	.
Query Sequence		M	K	I	F	L	E	N	L	Y	H	S	D	C	Y	F	L	P	I	R	D	N	.	Q	Q	V	L	V	G	V	E	L	I	T	H	F	S	S	E	D	G	T	V	R	I	P	T	S	R	V	I	A	Q	L	T	E	E	Q	H	W	Q	L	F	S	E	Q	L	E	L	L	K	S	C	Q	H	F	F	I	Q	.	.
Query Conservation																							.																																																									.	.
Alig confidence										.													.																																																									.	.
Template Conservation										.
Template Sequence		L	Q	Q	A	L	E	T	N	.	S	F	R	L	L	F	Q	P	V	I	S	L	R	G	D	S	H	E	N	Y	E	V	L	L	R	L	L	N	P	Q	G	Q	E	V	P	P	A	E	F	L	H	A	A	K	E	A	G	L	A	E	K	I	D	R	W	V	I	L	N	S	I	K	L	L	A	E	H	R	A	K	G
Template Known Secondary structure									T	.												S	S	S			S												T	T	S	S														T	S	T																					T	T	T
Template Predicted Secondary structure										.
Template SS confidence
		447	.	.	450	.	.	.	.		.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.					110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																		.	.	.	.																											.
Query SS confidence																																		.	.	.	.																											.
Query Sequence		H	K	L	F	A	W	L	N	L	T	P	Q	V	A	T	L	L	L	E	R	D	N	Y	A	G	E	L	L	K	Y	P	F	.	.	.	.	I	E	L	L	I	N	E	N	Y	P	H	L	N	E	G	K	D	N	R	G	L	L	S	L	S	Q	.	V	Y	P	L	V	L	G	N	L	G	A	G	N	S	T	M	K
Query Conservation																																		.	.	.	.																											.
Alig confidence																																		.	.	.	.																											.
Template Conservation
Template Sequence		H	Q	T	K	L	F	V	H	L	S	S	A	S	L	Q	D	P	G	L	L	P	W	L	G	V	A	L	K	A	A	R	L	P	P	E	S	L	V	F	Q	I	S	E	A	D	A	T	S	Y	L	K	Q	A	K	Q	L	T	Q	G	L	A	T	L	H	C	Q	A	A	I	S	Q	F	G	C	S	L	N	P	F	N
Template Known Secondary structure																		T	T						T	T	T	T	G	G	G	T			T	T														T														T	T									T		S	S	S	T	T	G
Template Predicted Secondary structure
Template SS confidence
		526	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		A	V	F	D	G	L	F	T	R	V	M	L	D	K	S	F	I	Q	Q	Q	I	T	H	R	S	F	E	P	F	I	R	A	I	Q	A	Q	I	S	P	C	C	N	C	I	I	A	G	G	I	D	T	A	E	I	L	A	Q	I	T	P	F	D	F	H	A	L	Q	G	C	L	W	.	P	A	V	P	I	N	Q	I
Query Conservation																																																																									.
Alig confidence																										.																																															.
Template Conservation																										.
Template Sequence		A	L	K	H	L	T	V	Q	F	I	K	I	D	G	S	F	V	Q	D	L	N	Q	V	E	.	N	Q	E	I	L	K	G	L	I	A	E	L	H	E	Q	Q	K	L	S	I	V	P	F	V	E	S	A	S	V	L	A	T	L	W	Q	A	G	A	T	Y	I	Q	G	Y	Y	L	Q	G	P	S	Q	A	M	D	Y
Template Known Secondary structure		G	G	G	T	S			S						G	G	G	G	S	S	T	T	S			.															T	T										S											T		S					T	T	T				B	S	S
Template Predicted Secondary structure																										.
Template SS confidence
		606	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.		630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.
		232
Predicted Secondary structure
Query SS confidence
Query Sequence		T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		685

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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