Job Description P76204 Confidence 29.33% Date Thu Jan 5 12:20:28 GMT 2012 Rank 215 Aligned Residues 155 % Identity 10% Template c3h12B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:mandelate racemase; PDBTitle: crystal structure of putative mandelate racemase from bordetella2 bronchiseptica rb50 Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	E	Q	L	E	L	L	K	S	C	Q	H	F	F	I	Q	H	K	L	F	A	W	L	N	L	T	P	Q	V	A	T	L	L	L	E	R	D	N	Y	A	G	E	L	L	K	Y	P	F	I	E	L	L	I	N	E	N	Y	P	H	L	N	E	G	K	D	N	R	G	L	L	S	L	S	Q	V	Y	P	L	V
Query Conservation
Alig confidence															.	.	.																																	.	.	.
Template Conservation															.	.	.																																	.	.	.
Template Sequence		P	R	K	D	A	A	N	L	R	A	M	R	Q	.	.	.	R	V	G	A	D	V	E	I	L	V	D	A	N	Q	S	L	G	R	H	D	A	L	A	M	L	R	I	L	D	E	A	G	.	.	.	C	Y	W	F	E	E	P	L	S	I	D	D	I	E	G	H	R	I	L	R	A	Q	G	T	P	V	R	I	A
Template Known Secondary structure															.	.	.				S	S	S							T	T																	T	T	.	.	.		S				S		S		T	T										T	T			S	S
Template Predicted Secondary structure															.	.	.																																	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190				.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																				.																																															.	.	.	.
Query SS confidence																				.																																															.	.	.	.
Query Sequence		L	G	N	L	G	A	G	N	S	T	M	K	A	V	F	D	G	L	.	F	T	R	V	M	L	D	K	S	F	I	Q	Q	Q	I	T	H	R	S	F	E	P	F	I	R	A	I	Q	A	Q	I	S	P	C	C	N	C	I	I	A	G	G	I	D	T	A	.	.	.	.	E	I	L	A	Q	I	T	P	F	D	F
Query Conservation																				.																																															.	.	.	.
Alig confidence																				.																	.	.	.	.	.	.	.																								.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.
Template Sequence		T	G	E	N	L	Y	T	R	N	A	F	N	D	Y	I	R	N	D	A	I	D	V	L	Q	A	D	A	S	R	A	G	G	I	T	E	.	.	.	.	.	.	.	A	L	A	I	S	A	S	A	A	S	A	H	L	A	W	N	P	H	T	F	N	D	I	I	T	V	A	A	N	L	H	L	V	A	A	S	P	H
Template Known Secondary structure				T	T													T	T			S						T	T	T	S	S					.	.	.	.	.	.	.											T	T								T	T	S														S	S	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.								.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	L	Q	G	C	L	W	P	A	V	P	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	M	F	E	W	D	I	T	H	N	D	L
Template Known Secondary structure										S	S		G	G
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions