Return to main results Retrieve Phyre Job Id

Job DescriptionP76204
Confidence69.73%DateThu Jan 5 12:20:28 GMT 2012
Rank105Aligned Residues111
% Identity12%Templatec3grcD_
PDB info PDB header:transferaseChain: D: PDB Molecule:sensor protein, kinase; PDBTitle: crystal structure of a sensor protein from polaromonas sp.2 js666
Resolution2.21 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   121........130.........140.........150.........160.........170.........180.........190.........200
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  LNEGKDNRGLLSLSQVYPLVLGNLGAGNSTMKAVFDGLFTRVMLDKSFIQQQITHRSFEPFIRAIQAQISPCCNCIIAGG
Query Conservation           
  
  
  






        
  
  
 



   
            
  
   
      




Alig confidence 















































.....

























.
Template Conservation 

       
   
   
  
        
   
     



 
   .....    
      

          
 
.
Template Sequence  EDDPDIARLLNLXLEKGGFDSDXVHSAAQALEQVARRPYAAXTVDLNL. . . . . PDQDGVSLIRALRRDSRTRDLAIVVV.
Template Known Secondary structure 
SSTT
SSTTS

S
SS
.....SSS
STTSTT
.
Template Predicted Secondary structure 














.....










.
Template SS confidence 















































































   554.....560.........570.........580.........590.........600. ........610.........620.......
 
   201........210.........220.........230.......
Predicted Secondary structure 
















Query SS confidence 




































Query Sequence  IDTAEILAQITPFDFHALQGCLWPAVPINQITTLVQR
Query Conservation 

       
  

    


 
 
     
      
Alig confidence 




































Template Conservation                  
    
 

     
   
  
Template Sequence  SANAREGELEFNSQPLAVSTWLEKPIDENLLILSLHR
Template Known Secondary structure 
TTTTT
TTSSS
SS

Template Predicted Secondary structure 











Template SS confidence 




































   628.630.........640.........650.........660....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions