Job Description P76204 Confidence 25.19% Date Thu Jan 5 12:20:28 GMT 2012 Rank 233 Aligned Residues 107 % Identity 14% Template c3dzdA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4 in the inactive2 state Resolution 2.40 Å

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		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		H	L	N	E	G	K	D	N	R	G	L	L	S	L	S	Q	.	V	Y	P	L	V	L	G	N	L	G	A	G	N	S	T	M	K	A	V	F	D	G	L	F	T	R	V	M	L	D	K	S	F	I	Q	Q	Q	I	T	H	R	S	F	E	P	F	I	R	A	I	Q	A	Q	I	S	P	C	C	N	C	I	I	A
Query Conservation																		.
Alig confidence																		.				.	.																										.	.	.	.	.																			.
Template Conservation																						.	.																										.	.	.	.	.																			.
Template Sequence		D	D	E	E	S	I	T	S	S	L	S	A	I	L	E	E	E	G	Y	H	.	.	P	D	T	A	K	T	L	R	E	A	E	K	K	I	K	E	L	F	F	P	V	I	V	L	D	.	.	.	.	.	V	W	X	P	D	G	D	G	V	N	F	I	D	F	I	K	E	N	.	S	P	D	S	V	V	I	V	I
Template Known Secondary structure			S															T	T			.	.					S	S											S			S						.	.	.	.	.	S			T	T			T	T	T									.		T	T
Template Predicted Secondary structure																						.	.																										.	.	.	.	.																			.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	I	D	T	A	E	I	L	A	Q	I	T	P	F	D	F	H	A	L	Q	G	C	L	W	P	A	V	P	I	N	Q	I	T	T	L	V	Q	R
Query Conservation
Alig confidence																					.	.	.
Template Conservation																					.	.	.
Template Sequence		T	G	H	G	S	V	D	T	A	V	K	A	I	K	K	G	A	Y	E	.	.	.	F	L	E	K	P	F	S	V	E	R	F	L	L	T	I	K	H
Template Known Secondary structure				S	S												T				.	.	.				S	S
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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