Job Description P76204 Confidence 36.57% Date Thu Jan 5 12:20:28 GMT 2012 Rank 185 Aligned Residues 143 % Identity 16% Template c3bdkB_ PDB info PDB header:lyase Chain: B: PDB Molecule:d-mannonate dehydratase; PDBTitle: crystal structure of streptococcus suis mannonate2 dehydratase complexed with substrate analogue Resolution 2.50 Å

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		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.													.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.													.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.													.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	L	E	R	D	N	Y	A	G	E	L	L	K	Y	P	F	I	E	L	L	I	N	E	N	Y	P	H	L	N	E	.	.	.	.	.	.	.	.	.	.	.	.	G	K	D	N	R	G	L	L	S	L	S	Q	.	V	Y	P	L	V	L	G	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.													.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.															.	.	.	.	.	.	.	.	.	.	.	.													.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.
Template Sequence		P	L	E	N	I	L	E	L	K	K	M	V	E	E	A	G	.	L	E	I	T	V	I	E	S	I	P	V	H	E	D	I	K	Q	G	K	P	N	R	D	A	L	I	E	N	Y	K	T	S	I	R	N	V	G	A	A	G	I	P	V	V	C	Y	N	F	M	P	V	F	D	W	T	R	S	D	L	H	H	P	L
Template Known Secondary structure																T	T	.																		T		T	T																			T										S	S		S				S	B	S	S
Template Predicted Secondary structure																		.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
				145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200														.	.	.	.	.	.
Predicted Secondary structure		.	.																																						.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																																						.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	G	A	G	N	S	T	M	K	A	V	F	D	G	L	F	T	R	V	M	L	D	K	S	F	I	Q	Q	Q	I	T	H	R	S	F	E	P	F	.	.	.	I	R	A	I	Q	A	Q	I	S	P	C	C	N	C	I	I	A	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	T	A	E	I
Query Conservation		.	.																																						.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																																						.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	D	G	S	T	S	L	A	F	L	K	S	D	L	A	G	V	D	P	V	A	I	I	E	N	Y	R	Q	N	I	S	E	E	D	L	W	A	N	L	E	Y	F	I	K	A	I	L	P	T	A	E	E	A	G	V	K	M	A	I	H	P	D	D	P	P	Y	G	I	F	G	L	P	R	I	I	T	G	Q	E	A
Template Known Secondary structure		T	T	S		B						S	S	S	S		S	S												T																									T									S	S	S	S			T	T							S
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		207	.	.	210	.	.	.							.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.
Query Sequence		L	A	Q	I	T	P	F	.	.	.	.	.	.	D	F	H	A	L	Q	G	C	L	W	P	A	V	P	I	N	Q	I	T	T	L	V	Q	R
Query Conservation									.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.											.
Template Conservation																									.
Template Sequence		V	E	R	F	L	N	L	Y	D	S	E	H	N	G	I	T	M	C	V	G	S	Y	A	.	S	D	P	K	N	D	V	L	A	M	T	E	Y
Template Known Secondary structure							T	T	S		S	T	T											T	.	T	S	T	T
Template Predicted Secondary structure																									.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions