 |
Job Description | P76204 | Confidence | 82.21% | Date | Thu Jan 5 12:20:28 GMT 2012 |
Rank | 59 | Aligned Residues | 110 |
% Identity | 8% | Template | c2nt3A_ |
PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:response regulator homolog; |
PDBTitle: receiver domain from myxococcus xanthus social motility protein frzs2 (y102a mutant)
|
Resolution | 1.30 Å |
|
 |
  |   |
121 | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | N | E | G | K | D | N | R | G | L | L | S | L | S | Q | V | Y | P | L | V | L | G | N | L | G | A | G | N | S | T | M | K | A | V | F | D | G | L | F | T | R | V | M | L | D | K | S | F | I | Q | Q | Q | I | T | H | R | S | F | E | P | F | I | R | A | I | Q | A | Q | I | S | P | C | C | N | C | I | I | A | G | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
Template Sequence |   |
E | S | D | T | A | L | S | A | T | L | R | S | A | L | E | G | R | G | F | T | V | D | E | T | T | D | G | K | G | S | V | E | Q | I | R | R | D | R | P | D | L | V | V | L | . |
. |
. |
. |
A | V | D | L | S | A | G | Q | N | G | Y | L | I | C | G | K | L | K | K | D | D | D | L | K | N | V | P | I | V | I | I | G |
Template Known Secondary structure |   |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  | S |
|
| S |  |  |  |  | . | . | . | . |  | S | B |
| S | T | T |
| B |  |  |  |  |  |  |  |  |  |  | S | T | T | T | T | T | S |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  | . | . | . | . |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
|
|
|
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
  |   |
201 | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | D | T | A | E | I | L | A | Q | I | T | P | F | D | F | H | A | L | Q | G | C | L | W | P | A | V | P | I | N | Q | I | T | T | L | V | Q | R |
Query Conservation |   |
|
|   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |
|
|
|   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   | . | . | . |   |
|
|   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |
Template Sequence |   |
N | P | D | G | F | A | Q | H | R | K | L | K | A | H | A | D | . |
. |
. |
E | A | V | A | K | P | V | D | A | D | Q | L | V | E | R | A | G | A |
Template Known Secondary structure |   |
| G | G | G |  |  |  |  |  | T | S | S | S |
|
| S | . | . | . |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | |
|
|
. | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|