Job Description P76204 Confidence 87.52% Date Thu Jan 5 12:20:28 GMT 2012 Rank 38 Aligned Residues 108 % Identity 15% Template c2jk1A_ PDB info PDB header:dna-binding Chain: A: PDB Molecule:hydrogenase transcriptional regulatory protein hupr1; PDBTitle: crystal structure of the wild-type hupr receiver domain Resolution 2.10 Å

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		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	N	E	G	K	D	N	R	G	L	L	S	L	S	Q	V	Y	P	L	V	L	G	N	L	G	A	G	N	S	T	M	K	A	V	F	D	G	L	F	T	R	V	M	L	D	K	S	F	I	Q	Q	Q	I	T	H	R	S	F	E	P	F	I	R	A	I	Q	A	Q	I	S	P	C	C	N	C	I	I	A	G
Query Conservation
Alig confidence																								.	.																							.	.	.	.	.
Template Conservation																								.	.																							.	.	.	.	.
Template Sequence		D	D	E	P	H	S	L	A	A	M	K	L	A	L	E	D	D	F	D	V	L	T	.	.	A	Q	G	A	E	A	A	I	A	I	L	E	E	E	W	V	Q	V	I	I	C	D	.	.	.	.	.	Q	R	M	P	G	R	T	G	V	D	F	L	T	E	V	R	E	R	W	P	E	T	V	R	I	I	I	T	G
Template Known Secondary structure			S	S												T	T	T	S					.	.		S	S											S									.	.	.	.	.	S			S	S	S														T	T	S							S
Template Predicted Secondary structure																								.	.																							.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	D	T	A	E	I	L	A	Q	I	T	P	F	D	F	H	A	L	Q	G	C	L	W	P	A	V	P	I	N	Q	I	T	T	L	V	Q	R
Query Conservation
Alig confidence																			.	.	.
Template Conservation																			.	.	.
Template Sequence		Y	T	D	S	A	S	M	M	A	A	I	N	D	A	G	I	H	.	.	.	Q	F	L	T	K	P	W	H	P	E	Q	L	L	S	S	A	R	N
Template Known Secondary structure			T	T											T	T			.	.	.					S	S
Template Predicted Secondary structure																			.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.				.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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