Return to main results Retrieve Phyre Job Id

Job DescriptionQ2M5U1
Confidence8.18%DateThu Jan 5 12:33:58 GMT 2012
Rank7Aligned Residues21
% Identity29%Templatec2kluA_
PDB info PDB header:immune system, membrane proteinChain: A: PDB Molecule:t-cell surface glycoprotein cd4; PDBTitle: nmr structure of the transmembrane and cytoplasmic domains2 of human cd4
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30......
Predicted Secondary structure 
Query SS confidence 




















Query Sequence  AALGFGGLAGTAAGAAKIVFV
Query Conservation    







 

  




 
Alig confidence 




















Template Conservation 


 

  
 


  
  

 
Template Sequence  ALIVLGGVAGLLLFIGLGIFF
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 




















   373......380.........390...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions