Job Description Q2M5U1 Confidence 6.14% Date Thu Jan 5 12:33:58 GMT 2012 Rank 9 Aligned Residues 17 % Identity 53% Template c1erfA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:transmembrane glycoprotein; PDBTitle: conformational mapping of the n-terminal fusion peptide of2 hiv-1 gp41 using 13c-enhanced fourier transform infrared3 spectroscopy (ftir) Resolution UNK

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	A	L	G	F	G	G	L	A	G	T	A	A	G	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	F	L	G	F	L	G	A	A	G	S	T	M	G	A	R
Template Known Secondary structure													S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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