Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADG4
Confidence100.00%DateThu Jan 5 11:20:58 GMT 2012
Rank3Aligned Residues237
% Identity44%Templatec3luzA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:extragenic suppressor protein suhb; PDBTitle: crystal structure of extragenic suppressor protein suhb from2 bartonella henselae, via combined iodide sad molecular replacement
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  PMLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHTIITEESGELEGTDQDVQWV
Query Conservation    
  
      
                  
   
 

 

   
  
   
    
   

 

            

Alig confidence 






















............












































Template Conservation    
  
  

  

         ............
 

 

   
  
   
    
   

 

            

Template Sequence  AVMNVMVQAAMKAGRSLVRDYGE. . . . . . . . . . . . DYVSQADRKAEKIIFNELSKARPKFGFLMEESEEIIGEDSQHRFI
Template Known Secondary structure 
............

TTTTS

B

S
Template Predicted Secondary structure 


............



















Template SS confidence 















































































   5....10.........20....... ..30.........40.........50.........60.........70..
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  IDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFKAK
Query Conservation 






 

  
 
   




   
 
  


  
     
 
  
 

  
                
         
Alig confidence 















































































Template Conservation 






 

  
 
   




   
 
  


  
       
  
 

  

  
            
         
Template Sequence  VDPLDGTTNFLHGIPFFAVSIALESQGKIVAGVIYNPINDELFTAERGSGAFFNDRRCRVSARRRLEDCVIATGMPTYLI
Template Known Secondary structure 
T
S

TTTTTTTTTTT






GGG




Template Predicted Secondary structure 
































Template SS confidence 















































































   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  QYATTYINIVGKLFNECADFRRTGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGELLVREAGGIVSDFTGGHNYMLTGNI
Query Conservation              
      

  

       

 
  
  
      

 

   
  



 
 
  
         
Alig confidence 
........






































































Template Conservation   ........           
  

  
    

 
  
  
      

 

   
  



 
 
  
         
Template Sequence  E. . . . . . . . LRNVMAEVSGIRRFGTAALDLAYVAAGRTDGFWEDNLQIWDMAAGILMVREAGGFVTDKEGGNDIFRKKNI
Template Known Secondary structure  ........
S

S
STTSSSSS

TT

TTSSS
T
Template Predicted Secondary structure  ........


























Template SS confidence 















































































   173 ......180.........190.........200.........210.........220.........230.........240....
 
   243......250.........
Predicted Secondary structure 
Query SS confidence 
















Query Sequence  VAGNPRVVKAMLANMRD
Query Conservation 

        

  
  
Alig confidence 
















Template Conservation 

        
   
  
Template Sequence  IAGNEHIRIKLERALKK
Template Known Secondary structure 

Template Predicted Secondary structure 


Template SS confidence 
















   245....250.........260.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions