Job Description P0ADG4 Confidence 3.86% Date Thu Jan 5 11:20:58 GMT 2012 Rank 62 Aligned Residues 126 % Identity 18% Template c2g29A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:nitrate transport protein nrta; PDBTitle: crystal structure of the periplasmic nitrate-binding2 protein nrta from synechocystis pcc 6803 Resolution 1.50 Å

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		135	.	.	.	.	140	.	.	.	.	.																		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	G	Y	R	L	R	G	S	T	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	L	D	G	T	I	L	A	T	G	F	P	F	K	A	K	Q	Y	A	T	T	Y	I	N	I	V	G	K	L	F	N	E	C	A	D	F	R	R	T	G	S	A	A	L	D	L	A	Y	V	A	A
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	N	G	Q	G	I	Q	L	G	N	N	Y	K	D	L	K	V	G	T	D	A	A	P	L	K	E	A	F	A	K	V	T	D	P	K	V	A	M	T	F	P	G	G	T	H	D	M	W	I	R	Y	W	L	A	A	G	G	M	E	P	G	K	D	F	S	T	I	V	V	P	P	A	Q	M	V	A	N	V	K	V
Template Known Secondary structure		B	S								G	G	G	G	G	G				S			T	T							T	S	S	S						S	S	T	T	S													T	T			B	T	T	T	B							G	G	G							T
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	V	D	G	F	F	E	I	G	L	R	P	W	D	F	A	A	G	E	L	L	V	R	E	A	G	G	I	V	S	D	F	T	G	G	H	N	Y	M	L	T	G	N	I	V	A	G	N	P	R	V	V	K	A	M	L	A	N	M	R	D	E	L	S	D	A	L	K
Query Conservation
Alig confidence											.	.				.	.	.	.
Template Conservation											.	.				.	.	.	.
Template Sequence		N	A	M	E	S	F	C	V	G	.	.	E	P	W	.	.	.	.	P	L	Q	T	V	N	Q	G	V	G	Y	Q	A	L	T	T	G	Q	L	W	K	D	H	P	E	K	A	F	G	M	R	A	D	W	V	D	Q	N	P	K	A	A	K	A	L	L	M	A	V	M	E
Template Known Secondary structure		T	S		S						.	.	T	T		.	.	.	.								T	S							G	G	G	T	B	T	T		B
Template Predicted Secondary structure											.	.				.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240			.	.	.					.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions