Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADG4
Confidence3.50%DateThu Jan 5 11:20:58 GMT 2012
Rank68Aligned Residues54
% Identity17%Templatec2d5wA_
PDB info PDB header:peptide binding proteinChain: A: PDB Molecule:peptide abc transporter, peptide-binding protein; PDBTitle: the crystal structure of oligopeptide binding protein from thermus2 thermophilus hb8 complexed with pentapeptide
Resolution1.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   211........220...... ...230.........240.........250.........260....
Predicted Secondary structure 


.......













Query SS confidence 















. . . . . . .





































Query Sequence  WDFAAGELLVREAGGI. . . . . . . VSDFTGGHNYMLTGNIVAGNPRVVKAMLANMRDELSDA
Query Conservation 

 

   
  



 .......
 
  
         


        

  
   
   
Alig confidence 















.......





































Template Conservation   
   
  

  

      
       
    
 
              
  
   
   
Template Sequence  FDLKKAEALLAEMGWRKGPDGILQRTVNGRTVRFEIEYVTTAGNVVRERTQQFFAEDLKKI
Template Known Secondary structure 

TT

TTS
TT

BTT
T
Template Predicted Secondary structure 

























Template SS confidence 




























































   372.......380.........390.........400.........410.........420.........430..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions