|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | P | M | L | N | I | A | V | R | A | A | R | K | A | G | N | L | I | A | K | N | Y | E | T | P | D | A | V | E | A | S | Q | K | G | S | N | D | F | V | T | N | V | D | K | A | A | E | A | V | I | I | D | T | I | R | K | S | Y | P | Q | H | T | I | I | T | E | E | S | G | E | L | E | G | T | D | Q | D | V | Q | W |
Query Conservation |   |
  |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |
|   |
|
|   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |
|
|
|
|
|   |   | . | . | . | . |   |   |   |   |   |   |
|
Template Sequence |   |
E | E | C | F | Q | A | A | V | Q | L | A | L | R | A | G | Q | I | I | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | A | L | T | E | L | V | T | E | T | D | H | L | V | E | D | L | I | I | S | E | L | R | E | R | F | P | S | H | R | F | I | A | E | K | C | V | . |
. |
. |
. |
L | T | H | S | P | T | W |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  | S |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |
|
|
|
| . | . | . | . |
|
| S | S |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
| . | . | . | . |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
|
|
|
. | . | . | . | . | . | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |
|  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | I | D | P | L | D | G | T | T | N | F | I | K | R | L | P | H | F | A | V | S | I | A | V | R | I | K | G | R | T | E | V | A | V | V | Y | D | P | M | R | N | E | L | F | T | A | T | R | G | Q | G | A | Q | L | N | G | Y | R | L | R | G | S | T | A | R | D | L | D | G | T | I | L | A | T | G | F | P | F | K | A |
Query Conservation |   |
|
|
|
|
|
|
|
|   |
|
|   |   |
|   |
|   |   |   |
|
|
|
|
|   |   |   |
|   |
|   |   |
|
|
|   |   |
|   |   |   |   |   |
|   |
|   |   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|   |
|
|   |   |
|   |
|   |   |   |
|
|
|
|
|   |   |   |
|   |   |   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
I | I | D | P | I | D | G | T | C | N | F | V | H | R | F | P | T | V | A | V | S | I | G | F | A | V | R | Q | E | L | E | F | G | V | I | Y | H | C | T | E | E | R | L | Y | T | G | R | R | G | R | G | A | F | C | N | G | Q | R | L | R | V | S | G | E | T | D | L | S | K | A | L | V | L | T | E | I | G | P | K | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |
|  |  |  |  |  |  | T |
| S |
|
|  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  | T | T | T | T |  |  |  |  |  |  | T | T | T |  |  |  |  | T | T |  |  |
|
|
|
|
|
|
|
| G | G | G |
|  |  |  |  |
|
|
| S |
|
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |
|  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
  |
  |   |
162 | . | . | . | . | . | . | . | |
|
170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | Q | Y | A | T | T | Y | I | . |
. |
N | I | V | G | K | L | F | N | E | C | A | D | F | R | R | T | G | S | A | A | L | D | L | A | Y | V | A | A | G | R | V | D | G | F | F | E | I | G | L | R | P | W | D | F | A | A | G | E | L | L | V | R | E | A | G | G | I | V | S | D | F | T | G | G | H | N | Y | M | L | T |
Query Conservation |   |
  |   |   |   |   |   |   |   | . | . |   |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |
|
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |
|
|   |
|
|   |   |   |
|   |   |
|
|
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|   |   |
|   |   |
|
|
|
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
D | P | A | T | L | K | L | F | L | S | N | M | E | R | L | L | H | A | K | A | H | G | V | R | V | I | G | S | S | T | L | A | L | C | H | L | A | S | G | A | A | D | A | Y | Y | Q | F | G | L | H | C | W | D | L | A | A | A | T | V | I | I | R | E | A | G | G | I | V | I | D | T | S | G | G | P | L | D | L | M | A |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |
|
| S |
|  |  |  |  |  |  |  |  |  |  | T | S |
| S |  |  |  |  |  | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |
| T | T | S | S | B |
|
| T | T | T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
179 | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . |
  |
  |   |
240 | . | . | . | . | . | |
. | . | . | . | 250 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | N | I | V | A | G | . |
N | P | R | V | V | K | A | M | L | A | N | M | R |
Query Conservation |   |
  |   |
|
|
|   | . |   |   |   |   |   |   |   |
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |
Template Sequence |   |
C | R | V | V | A | A | S | T | R | E | M | A | M | L | I | A | Q | A | L | Q |
Template Known Secondary structure |   |
T |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
259 | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . |
  |