|   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | |
|
. | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
|  |  |  |
|
|  |  |  |
|
|
| . | . |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | S | F | L | S | G | T | W | Q | S | G | R | . |
. |
G | R | S | R | L | I | H | H | A | I | S | G | E | A | L | W | E | V | T | S | E | G | L | D | M | A | A | A | R | Q | F | A | I | E | K | G | A | P | A | L | R | A | M | T | F | I | E | R | A | A | M | L | K | A | V | A | K | H | L | L | S | E | K | E | R | F |
Query Conservation |   |
  |   |   |
|   |
|   |
|   |   |   |   | . | . |   |   |   |   |   |
|   |   |
|
|
|
|
|   |
|   |   |
|   |   |   |   |   |
|   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|
Template Sequence |   |
L | N | Y | W | G | G | R | R | I | K | S | K | D | G | A | T | T | E | P | V | F | E | P | A | T | G | R | V | L | C | Q | M | V | P | C | G | A | E | E | V | D | Q | A | V | Q | S | A | Q | A | A | Y | L | K | W | S | K | M | A | G | I | E | R | S | R | V | M | L | E | A | A | R | I | I | R | E | R | R | D | N | I |
Template Known Secondary structure |   |
|  |  |  | T | T |  |  |  |
|
|
| T | T |
|
|
|  |  |  |  |
| T | T | T |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
  |
  |   |
83 | . | |
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
Predicted Secondary structure |   |
 |  | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | A | . |
L | S | A | Q | T | G | A | T | R | A | D | S | W | V | D | I | E | G | G | I | G | T | L | F | T | Y | A | S | L | G | S | R | E | L | P | D | D | T | L | W | P | E | D | E | L | I | P | L | S | K | E | G | G | F | A | A | R | H | L | L | T | S | K | S | G | V | A | V | H | I | N | A | F | N | F | P | C |
Query Conservation |   |
|   | . |
|   |   |
|   |
|
|   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|   |   |
|   |
|
|
|
|
|
|
Alig confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |
|   |
|
|   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |
|
|
|   |   |
|   |
|   |
|   |
|   |
Template Sequence |   |
A | K | L | E | V | I | N | N | G | K | T | I | T | E | A | E | Y | D | I | D | A | A | W | Q | C | I | E | Y | Y | A | G | L | A | P | T | L | S | G | Q | H | I | Q | L | P | G | G | A | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | Y | T | R | R | E | P | L | G | V | C | A | G | I | L | A | W | N | Y | P | F |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |
|
|
|
|  |  |  |
| G | G | G |
|  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
| S |  |  |  |  |  |
|
| S | S | S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
101 | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . |
  |
  |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | |
|
. | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
| . | . |
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
W | G | M | L | E | K | L | A | P | T | W | L | G | G | M | P | A | I | I | K | P | A | T | A | T | A | Q | L | T | Q | A | M | V | K | S | I | V | D | S | G | L | V | P | E | G | A | I | S | L | I | C | G | . |
. |
S | A | G | D | L | L | D | H | L | D | S | Q | D | V | V | T | F | T | G | S | A | A | T | G | Q | M |
Query Conservation |   |
  |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |
|
|
|   |
|
|   |
|
|   |
|
|
|   |
| . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |
|   |
|   |
|   |
|
|
| . |
|
|   |
|
|
|   |
|
|   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |
|
|
|
|   |   |   |
|   |   |
Template Sequence |   |
M | I | A | A | W | K | C | A | P | A | L | A | C | G | N | A | V | V | F | K | P | S | P | M | T | P | V | T | G | V | I | L | A | E | I | F | H | E | A | G | . |
V | P | V | G | L | V | N | V | V | Q | G | G | A | E | T | G | S | L | L | C | H | H | P | N | V | A | K | V | S | F | T | G | S | V | P | T | G | K | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
|
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | . |
|
| T | T | S |  |  |  |
|
|
| S |  |  |  |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  | S |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | |
210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . |
  |
  |   |
240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | R | V | Q | P | N | I | V | A | K | S | I | P | F | T | M | E | A | D | S | L | N | C | C | V | L | G | E | D | V | T | P | D | Q | P | E | F | A | L | F | I | R | E | V | V | R | E | M | T | T | K | A | G | Q | K | C | T | A | I | R | R | I | I | V | P | Q | A | L | V | N | A | V | S | D | A | L | V | A | R | L |
Query Conservation |   |
|   |   |   |   |
|
|
|   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |   |   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |
|   |   |
|
|   |
|   |   |   |
|   |
|   |
|   |   |   |
|   |   |   |   |
Alig confidence |   |
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |
|
|   |   |
|
| . | . | . | . | . |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |   |
|   |
|   |   |   |
|   |
|   |
|   |   |   |
|   |   |   |   |
Template Sequence |   |
V | M | E | . |
. |
M | S | A | K | T | V | K | H | V | T | L | E | L | G | G | K | S | P | L | L | I | F | K | D | C | . |
. |
. |
. |
. |
E | L | E | N | A | V | R | G | A | L | M | A | N | F | L | T | Q | G | Q | V | C | T | N | G | T | R | V | F | V | Q | R | E | I | M | P | Q | F | L | E | E | V | V | K | R | T |
Template Known Secondary structure |   |
 |  |  | . | . |  |  |  | T | T | T |
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |
| T | T | S | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  | T | T |
| G | G | G | G |
|
| T | T |
|
|
|  |  |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  | . | . |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
| . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
249 | 250 | . | |
|
. | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . |
  |
  |   |
320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | K | V | V | V | G | D | P | A | Q | E | G | V | K | M | G | A | L | V | N | A | E | Q | R | A | D | V | Q | E | K | V | N | I | L | L | A | A | G | C | E | I | R | L | G | G | Q | A | . |
. |
. |
. |
. |
D | L | S | A | A | G | A | F | F | P | P | T | L | L | Y | C | P | Q | P | D | E | T | P | A | V | H | A | T |
Query Conservation |   |
  |   |
|   |
|
|   |
|   |
|   |   |
|   |   |
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |
|   |   |
|
|   |   | . | . | . | . | . |   |   |   |   |   |
|   |
|   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |
|   |
|   |   |
|   |   |
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|
|   |   |
|   |   |   |   |   | . | . |   |   |   |
|
Template Sequence |   |
K | A | I | V | V | G | D | P | L | L | T | E | T | R | M | G | G | L | I | S | K | P | Q | L | D | K | V | L | G | F | V | A | Q | A | K | K | E | G | A | R | V | L | C | G | G | E | P | L | T | P | S | D | P | K | L | K | N | G | Y | F | M | S | P | C | V | L | D | N | C | R | D | D | M | T | . |
. |
C | V | K | E |
Template Known Secondary structure |   |
 | T |
|
| B | S |
| T | T | S | T | T |
|
| B |
|
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |
|
| S | B |
|
|
| S | S | G | G | G | T | T | S |
|
| B |
|
|  |  |  |  | S |
|
| T | T | S |  | . | . |  |  |  | S |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  | . | . |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
322 | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | |
|
. | . | . | . |
  |
  |   |
395 | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | A | F | G | P | V | A | T | L | M | P | A | Q | N | Q | R | H | A | L | Q | L | A | C | A | G | G | G | S | L | A | G | T | L | V | T | A | D | P | Q | I | A | R | Q | F | I | A | D | A | A | R | T | H | G | R | I | Q | I | L | N | E | E | S | A | K | E | S | T | G | H | G | S | P | L | P | Q | L | V | H | G | G |
Query Conservation |   |
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |
|
|
|
|   |
|
|
|   |   |   |
|
|
|   |
|
|
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |
|
|   |   |   |   |   |   |
|   |   |
|
|
|   |
|   |
|   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|   |
|   |   |   |   |   |   |
|
|
|
|   |   |   |
|   |   |   |   |
|
|   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
| . | . |
|   |
|   |
|
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |
|
|
|
|
Template Sequence |   |
E | I | F | G | P | V | M | S | V | L | P | F | D | T | E | E | E | V | L | Q | R | A | N | N | T | T | F | G | L | A | S | G | V | F | T | R | D | I | S | R | A | H | R | V | A | A | N | L | E | A | . |
. |
G | T | C | Y | I | N | T | Y | S | I | S | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
V | E | V | P | F | G | G |
Template Known Secondary structure |   |
|
|
| S | S |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
| S | S |
|
| S |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  | S |
| S | . | . | S |  |  |  |  | S |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | T | T | S |
| B |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . | . |
|  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | |
|
450 | . | . | . | . | . | . | . | . | . | 460 | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . |
  |
  |   |
475 | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | G | R | A | G | G | G | E | E | L | G | G | L | R | A | V | K | H | Y | M | Q | R | T | A | V | Q |
Query Conservation |   |
  |   |   |
|
|   |
|   |
|   |
|
|   |   |   |
|   |   |
|   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|   |
|   |   | . |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|   |
Template Sequence |   |
Y | K | M | S | G | F | G | R | E | . |
N | G | Q | A | T | V | D | Y | Y | S | Q | L | K | T | V | I |
Template Known Secondary structure |   |
S | G | G | G |  |  |
|
| B | . | S | T | T | G | G | G | G | G | S |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
| . |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
469 | 470 | . | . | . | . | . | . | . | |
. | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . |
  |