Job Description P77455 Confidence 100.00% Date Thu Jan 5 12:29:26 GMT 2012 Rank 7 Aligned Residues 467 % Identity 22% Template c3rh9A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:succinate-semialdehyde dehydrogenase (nad(p)(+)); PDBTitle: the crystal structure of oxidoreductase from marinobacter aquaeolei Resolution 2.63 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		M	Q	Q	L	A	S	F	L	S	G	T	W	Q	S	G	.	R	G	R	S	R	L	I	H	H	A	I	S	G	E	A	L	W	E	V	T	S	E	G	L	D	M	A	A	A	R	Q	F	A	I	E	K	G	A	P	A	L	R	A	M	T	F	I	E	R	A	A	M	L	K	A	V	A	K	H	L	L	S	E	K
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		L	E	N	L	T	G	Y	I	G	G	R	W	K	D	S	A	G	G	A	T	F	D	V	Y	N	P	A	T	G	S	V	I	A	K	V	P	S	X	P	E	E	D	V	V	A	A	V	E	A	G	Q	S	A	L	R	L	T	N	P	W	P	I	E	T	R	R	K	W	L	E	D	I	R	D	G	L	K	E	N	R
Template Known Secondary structure		G	S			S				T	T							T	T								T	T	T																												S	S	S																					T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		E	R	F	Y	A	.	L	S	A	Q	T	G	A	T	R	A	D	S	W	V	D	I	E	G	G	I	G	T	L	F	T	Y	A	S	L	G	S	R	E	L	P	D	D	T	L	W	P	E	D	E	L	I	P	L	S	K	E	G	G	F	A	A	R	H	L	L	T	S	K	S	G	V	A	V	H	I	N	A	F	N
Query Conservation							.
Alig confidence							.																																											.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.
Template Sequence		E	E	I	G	R	I	L	C	X	E	H	G	K	P	W	K	E	A	Q	G	E	V	D	Y	A	A	G	F	F	D	Y	C	A	K	H	I	S	A	L	D	S	H	T	I	P	E	K	P	.	.	.	.	.	.	.	.	.	.	K	D	C	T	W	T	V	H	Y	R	P	V	G	V	T	G	L	I	V	P	W	N
Template Known Secondary structure																																					G	G	G	G						S			G	.	.	.	.	.	.	.	.	.	.	G	G												S							S	S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.											.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.				.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.
Query SS confidence																																																											.	.	.
Query Sequence		F	P	C	W	G	M	L	E	K	L	A	P	T	W	L	G	G	M	P	A	I	I	K	P	A	T	A	T	A	Q	L	T	Q	A	M	V	K	S	I	V	D	S	G	L	V	P	E	G	A	I	S	L	I	C	G	S	A	.	.	.	G	D	L	L	D	H	L	D	S	Q	D	V	V	T	F	T	G	S	A	A
Query Conservation																																																											.	.	.
Alig confidence																																													.														.	.	.
Template Conservation																																													.
Template Sequence		F	P	I	G	X	I	A	K	K	L	S	A	A	L	A	A	G	C	P	S	V	I	K	P	A	S	E	T	P	L	T	X	I	A	F	F	S	V	X	D	K	L	D	.	L	P	D	G	X	V	N	L	V	X	G	K	A	S	V	I	G	K	V	L	C	E	H	K	D	V	P	X	L	S	F	T	G	S	T	E
Template Known Secondary structure		S	T	T														T									T	T	S												T	T	T	T	.			T	T	S						S													T	T								S
Template Predicted Secondary structure																																													.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	Q	M	L	R	V	Q	P	N	I	V	A	K	S	I	P	F	T	M	E	A	D	S	L	N	C	C	V	L	G	E	D	V	T	P	D	Q	P	E	F	A	L	F	I	R	E	V	V	R	E	M	T	T	K	A	G	Q	K	C	T	A	I	R	R	I	I	V	P	Q	A	L	V	N	A	V	S	D	A	L
Query Conservation
Alig confidence										.	.																									.	.	.	.	.
Template Conservation										.	.																									.	.	.	.	.
Template Sequence		V	G	R	K	L	I	V	D	.	.	T	A	E	Q	V	K	K	L	A	L	E	L	G	G	N	A	P	F	I	V	F	D	D	A	.	.	.	.	.	D	L	E	A	A	A	D	N	L	I	A	N	K	F	R	G	G	G	Q	T	C	V	C	A	N	R	I	F	V	H	E	K	V	A	D	A	F	G	Q	K	L
Template Known Secondary structure										.	.	T	T	T	T	T																	T	T	S	.	.	.	.	.															G	G	G	G		S	S	S	S								T	T	T
Template Predicted Secondary structure										.	.																									.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.						.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	R	L	Q	K	V	V	V	G	D	P	A	Q	E	G	V	K	M	G	A	L	V	N	A	E	Q	R	A	D	V	Q	E	K	V	N	I	L	L	A	A	G	C	E	I	R	L	G	G	Q	A	D	L	S	A	A	G	A	F	F	P	P	T	L	L	Y	C	P	Q	P	D	E	T	P	A	V	H	A	T	E
Query Conservation
Alig confidence																																																																											.	.
Template Conservation																																																																											.	.
Template Sequence		A	E	R	V	N	K	X	T	V	G	D	G	X	N	D	G	I	D	I	G	P	L	I	N	K	Q	G	F	D	K	V	K	R	H	L	Q	D	A	L	D	K	G	A	S	L	V	A	G	K	Q	P	A	E	L	G	D	G	L	F	F	P	P	T	V	V	Q	G	V	D	R	E	X	C	.	.	C	Y	Q	E	E
Template Known Secondary structure										B	S		T	T	S	T	T		S	B				S																		T	T						S			G	G	G			S	S	S												T	T	S		.	.				S
Template Predicted Secondary structure																																																																											.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.			.	.	.	.	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	G	P	V	A	T	L	M	P	A	Q	N	Q	R	H	A	L	Q	L	A	C	A	G	G	G	S	L	A	G	T	L	V	T	A	D	P	Q	I	A	R	Q	F	I	A	D	A	A	R	T	H	G	R	I	Q	I	L	N	E	E	S	A	K	E	S	T	G	H	G	S	P	L	P	Q	L	V	H	G	G	P
Query Conservation
Alig confidence																																																			.	.								.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.								.	.	.	.	.	.	.	.	.
Template Sequence		T	F	G	P	L	V	P	X	A	L	F	R	T	E	E	E	V	I	D	A	G	N	D	T	E	F	G	L	A	S	Y	V	F	T	A	D	A	E	R	A	Q	R	V	A	A	G	L	R	F	.	.	G	H	V	G	W	N	T	.	.	.	.	.	.	.	.	.	G	T	G	P	T	P	E	A	P	F	G	G	X
Template Known Secondary structure				S	S																		T		S	S			S							S															.	.	S					S		.	.	.	.	.	.	.	.	.						T	T	S		B			S
Template Predicted Secondary structure																																																			.	.								.	.	.	.	.	.	.	.	.
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.			.	.	.	.	440	.	.										.	.	.	.	.	.	.	450	.	.	.	.	.
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	A	G	G	G	E	E	L	G	G	L	R	A	V	K	H	Y	M	Q	R	T	A	V
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		K	A	S	G	I	G	R	E	.	G	G	L	E	G	L	F	E	F	V	E	A	Q	T	V
Template Known Secondary structure		G	G	G			S		B	.	S						T	T	T
Template Predicted Secondary structure										.
Template SS confidence
		456	.	.	.	460	.	.	.		.	.	.	.	.	.	470	.	.	.	.	.	.	.	.