Job Description P77455 Confidence 100.00% Date Thu Jan 5 12:29:26 GMT 2012 Rank 24 Aligned Residues 465 % Identity 22% Template c3r31A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:betaine aldehyde dehydrogenase; PDBTitle: crystal structure of betaine aldehyde dehydrogenase from agrobacterium2 tumefaciens Resolution 2.15 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		Q	Q	L	A	S	F	L	S	G	T	W	Q	S	G	.	R	G	R	S	R	L	I	H	H	A	I	S	G	E	A	L	W	E	V	T	S	E	G	L	D	M	A	A	A	R	Q	F	A	I	E	K	G	A	P	A	L	R	A	M	T	F	I	E	R	A	A	M	L	K	A	V	A	K	H	L	L	S	E	K	E
Query Conservation																.
Alig confidence																.
Template Conservation
Template Sequence		P	K	A	S	H	F	I	D	G	D	Y	V	E	D	N	T	G	T	P	F	E	S	I	F	P	A	T	G	E	M	I	A	K	L	H	A	A	T	P	A	I	V	E	R	A	I	A	S	A	K	R	A	Q	K	E	W	A	A	M	S	P	M	A	R	G	R	I	L	K	R	A	A	D	I	M	R	E	R	N	D
Template Known Secondary structure			S	S	S				T	T						T	T	S								T	T	T																																S																			T
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		81	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure						.															.
Query SS confidence						.															.
Query Sequence		R	F	Y	A	.	L	S	A	Q	T	G	A	T	R	A	D	S	W	V	.	D	I	E	G	G	I	G	T	L	F	T	Y	A	S	L	G	S	R	E	L	P	D	D	T	L	W	P	E	D	E	L	I	P	L	S	K	E	G	G	F	A	A	R	H	L	L	T	S	K	S	G	V	A	V	H	I	N	A	F	N
Query Conservation						.															.
Alig confidence						.															.																																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	S	T	L	E	T	L	D	T	G	K	P	I	Q	E	T	I	V	A	D	P	T	S	G	A	D	A	F	E	F	F	G	G	I	A	P	S	A	L	N	G	D	Y	I	P	L	G	G	D	F	.	.	.	.	.	.	.	.	.	.	.	A	Y	T	K	R	V	P	L	G	V	C	V	G	I	G	A	W	N
Template Known Secondary structure																						S																			T								S	S	S		.	.	.	.	.	.	.	.	.	.	.									S								S	S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.												.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.			.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		F	P	C	W	G	M	L	E	K	L	A	P	T	W	L	G	G	M	P	A	I	I	K	P	A	T	A	T	A	Q	L	T	Q	A	M	V	K	S	I	V	D	S	G	L	V	P	E	G	A	I	S	L	I	C	G	.	.	S	A	G	D	L	L	D	H	L	D	S	Q	D	V	V	T	F	T	G	S	A	A	T
Query Conservation																																																									.	.
Alig confidence																																													.												.	.
Template Conservation																																													.
Template Sequence		Y	P	Q	Q	I	A	C	W	K	A	A	P	A	L	V	A	G	N	A	M	V	F	K	P	S	E	N	T	P	L	G	A	L	K	I	A	E	I	L	I	E	A	G	.	L	P	K	G	L	F	N	V	I	Q	G	D	R	D	T	G	P	L	L	V	N	H	P	D	V	A	K	V	S	L	T	G	S	V	P	T
Template Known Secondary structure		S															T	T									T	T	S		S												T	T	.			T	T	S								T	T							T		T	T								S
Template Predicted Secondary structure																																													.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	M	L	R	V	Q	P	N	I	V	A	K	S	I	P	F	T	M	E	A	D	S	L	N	C	C	V	L	G	E	D	V	T	P	D	Q	P	E	F	A	L	F	I	R	E	V	V	R	E	M	T	T	K	A	G	Q	K	C	T	A	I	R	R	I	I	V	P	Q	A	L	V	N	A	V	S	D	A	L	V
Query Conservation
Alig confidence											.	.																							.	.	.	.	.
Template Conservation											.	.																							.	.	.	.	.
Template Sequence		G	R	K	V	A	A	A	A	A	.	.	G	H	L	K	H	V	T	M	E	L	G	G	K	S	P	M	I	V	F	D	D	A	.	.	.	.	.	D	I	E	S	A	V	G	G	A	M	L	G	N	F	Y	S	S	G	Q	V	C	S	N	G	T	R	V	F	V	Q	K	K	A	K	A	R	F	L	E	N	L	K
Template Known Secondary structure											.	.		T	T																	T	T	S	.	.	.	.	.														T	S							T	T								G	G	G
Template Predicted Secondary structure											.	.																							.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.						.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.			.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		A	R	L	Q	K	V	V	V	G	D	P	A	Q	E	G	V	K	M	G	A	L	V	N	A	E	Q	R	A	D	V	Q	E	K	V	N	I	L	L	A	A	G	C	E	I	R	L	G	G	Q	A	D	L	S	A	A	.	.	G	A	F	F	P	P	T	L	L	Y	C	P	Q	P	D	E	T	P	A	V	H	A	T
Query Conservation																																																									.	.
Alig confidence																																																									.	.																		.	.
Template Conservation																																																																												.	.
Template Sequence		R	R	T	E	A	M	I	L	G	D	P	L	D	Y	A	T	H	L	G	P	L	V	S	K	A	Q	Q	E	K	V	L	S	Y	I	E	K	G	K	A	E	G	A	T	L	I	T	G	G	G	I	P	N	N	V	A	G	E	G	A	Y	V	Q	P	T	V	F	A	D	V	T	D	D	M	T	.	.	I	A	R	E
Template Known Secondary structure									B			T	T	S	T	T		S	B			B	S																			T								S			S	S			S	S	S	B												T	T	S		.	.				S
Template Predicted Secondary structure																																																																												.	.
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.			.	.	390	.
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	F	G	P	V	A	T	L	M	P	A	Q	N	Q	R	H	A	L	Q	L	A	C	A	G	G	G	S	L	A	G	T	L	V	T	A	D	P	Q	I	A	R	Q	F	I	A	D	A	A	R	T	H	G	R	I	Q	I	L	N	E	E	S	A	K	E	S	T	G	H	G	S	P	L	P	Q	L	V	H	G	G
Query Conservation
Alig confidence																																																				.	.													.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.													.	.	.	.	.	.	.	.	.
Template Sequence		E	I	F	G	P	V	M	C	V	L	D	F	D	D	E	D	E	V	L	A	R	A	N	A	T	E	F	G	L	A	G	G	V	F	T	A	D	L	A	R	A	H	R	V	V	D	G	L	E	A	.	.	G	T	L	W	I	N	T	Y	N	L	C	P	.	.	.	.	.	.	.	.	.	V	E	I	P	F	G	G
Template Known Secondary structure				S	S	S																				S	S			S							S												S			.	.	S					S	S						.	.	.	.	.	.	.	.	.	T	T	S		B
Template Predicted Secondary structure																																																				.	.													.	.	.	.	.	.	.	.	.
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.			.	.	.	.	.	.	.	.	450	.	.	.										.	.	.	.	.	.	460
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	R	A	G	G	G	E	E	L	G	G	L	R	A	V	K	H	Y	M	Q	R	T	A	V
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		S	K	Q	S	G	F	G	R	E	.	N	S	A	A	A	L	E	H	Y	S	E	L	K	T	V
Template Known Secondary structure				T	T					B	.	S	T	G	G	G	G	G	G	S
Template Predicted Secondary structure											.
Template SS confidence
		461	.	.	.	.	.	.	.	.		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.