Job Description P77455 Confidence 100.00% Date Thu Jan 5 12:29:26 GMT 2012 Rank 28 Aligned Residues 462 % Identity 22% Template c3prlD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:nadp-dependent glyceraldehyde-3-phosphate dehydrogenase; PDBTitle: crystal structure of nadp-dependent glyceraldehyde-3-phosphate2 dehydrogenase from bacillus halodurans c-125 Resolution 2.00 Å

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		5	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		A	S	F	L	S	G	T	W	Q	S	G	.	R	G	R	S	R	L	I	H	H	A	I	S	G	E	A	L	W	E	V	T	S	E	G	L	D	M	A	A	A	R	Q	F	A	I	E	K	G	A	P	A	L	R	A	M	T	F	I	E	R	A	A	M	L	K	A	V	A	K	H	L	L	S	E	K	E	R	F	Y
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		N	I	L	R	N	G	E	W	V	E	S	R	T	G	E	R	I	S	I	S	A	P	A	S	G	V	A	L	G	S	I	P	A	L	S	Q	E	E	V	N	D	A	I	Q	G	A	K	D	A	Q	K	I	W	K	I	R	P	I	H	E	R	V	D	L	L	Y	A	W	A	D	L	L	E	E	R	K	E	I	I	G
Template Known Secondary structure						T	T						T	T									T	T	T																														T	T	S																			T
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		84		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		A	.	L	S	A	Q	T	G	A	T	R	A	D	S	W	V	D	I	E	G	G	I	G	T	L	F	T	Y	A	S	L	G	S	R	E	L	P	D	D	T	L	W	P	E	D	E	L	I	P	L	S	K	E	G	G	F	A	A	R	H	L	L	T	S	K	S	G	V	A	V	H	I	N	A	F	N	F	P	C	W
Query Conservation			.
Alig confidence			.																																									.	.	.	.	.
Template Conservation																																												.	.	.	.	.
Template Sequence		E	L	I	M	H	E	V	A	K	P	K	K	S	A	I	G	E	V	S	R	T	A	D	I	I	R	H	T	A	D	E	A	L	R	L	N	G	E	T	L	K	G	.	.	.	.	.	D	Q	F	K	G	G	S	S	K	K	I	A	L	V	E	R	E	P	L	G	V	V	L	A	I	S	P	F	N	Y	P	V	N
Template Known Secondary structure								S																										T	T								G	.	.	.	.	.	G	G	S	T	T			T	T											S								S	S	S	T	T
Template Predicted Secondary structure																																												.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.						.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.				.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.
Query SS confidence																																																					.	.	.
Query Sequence		G	M	L	E	K	L	A	P	T	W	L	G	G	M	P	A	I	I	K	P	A	T	A	T	A	Q	L	T	Q	A	M	V	K	S	I	V	D	S	G	L	V	P	E	G	A	I	S	L	I	C	G	.	.	.	S	A	G	D	L	L	D	H	L	D	S	Q	D	V	V	T	F	T	G	S	A	A	T	G	Q	M
Query Conservation																																																					.	.	.
Alig confidence																																									.												.	.	.
Template Conservation																																									.
Template Sequence		L	A	A	A	K	I	A	P	A	L	V	T	G	N	T	V	V	F	K	P	A	T	Q	G	S	L	S	G	I	K	M	V	E	A	L	A	D	A	G	.	A	P	E	G	I	I	Q	V	V	T	G	R	G	S	V	I	G	D	H	L	V	E	H	P	G	I	D	M	I	T	F	T	G	G	T	T	T	G	E	R
Template Known Secondary structure													T	T									S	T	T														T	T	.			T	T	S								S	S	S	S						T		T	T								S
Template Predicted Secondary structure																																									.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	V	Q	P	N	I	V	A	K	S	I	P	F	T	M	E	A	D	S	L	N	C	C	V	L	G	E	D	V	T	P	D	Q	P	E	F	A	L	F	I	R	E	V	V	R	E	M	T	T	K	A	G	Q	K	C	T	A	I	R	R	I	I	V	P	Q	A	L	V	N	A	V	S	D	A	L	V	A	R	L
Query Conservation
Alig confidence			.	.	.	.																										.	.	.	.	.
Template Conservation			.	.	.	.																										.	.	.	.	.
Template Sequence		I	.	.	.	.	S	E	K	A	K	M	I	P	V	V	L	E	L	G	G	K	D	P	A	I	V	L	D	D	A	.	.	.	.	.	D	L	K	L	T	A	S	Q	I	V	S	G	A	F	S	Y	S	G	Q	R	C	T	A	I	K	R	V	F	V	Q	D	S	V	A	D	Q	L	V	A	N	I	K	E	L	V
Template Known Secondary structure			.	.	.	.						S	S																T	T		.	.	.	.	.															G	G	G	G			S	S	S
Template Predicted Secondary structure			.	.	.	.																										.	.	.	.	.
Template SS confidence
		247					.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.						.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	V	V	V	G	D	P	A	Q	E	G	V	K	M	G	A	L	V	N	A	E	Q	R	A	D	V	Q	E	K	V	N	I	L	L	A	A	G	C	E	I	R	L	G	G	Q	A	D	L	S	A	A	G	A	F	F	P	P	T	L	L	Y	C	P	Q	P	D	E	T	P	A	V	H	A	T	E	A	F	G	P
Query Conservation
Alig confidence										.																																								.	.	.	.																		.	.
Template Conservation										.																																								.	.	.	.																		.	.
Template Sequence		E	Q	L	T	V	G	S	P	.	E	D	D	A	D	I	T	P	V	I	D	E	K	S	A	A	F	I	Q	G	L	I	D	D	A	L	E	N	G	A	T	L	L	S	G	N	K	R	Q	.	.	.	.	G	N	L	L	S	P	T	L	L	D	D	V	T	P	A	M	R	.	.	V	A	W	E	E	P	F	G	P
Template Known Secondary structure		T	T			B	S		G	.	G	G	T		S	B				S																		T	T											.	.	.	.	T	T									S			T	T	S	G	.	.	G	G	T	S				S	S
Template Predicted Secondary structure										.																																								.	.	.	.																		.	.
Template SS confidence
		318	.	320	.	.	.	.	.		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.					.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.			.	.	.	.	.	.	.	.	390
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	T	L	M	P	A	Q	N	Q	R	H	A	L	Q	L	A	C	A	G	G	G	S	L	A	G	T	L	V	T	A	D	P	Q	I	A	R	Q	F	I	A	D	A	A	R	T	H	G	R	I	Q	I	L	N	E	E	S	A	K	E	S	T	G	H	G	S	P	L	P	Q	L	V	H	G	G	P	G	R	A	G
Query Conservation
Alig confidence																																															.	.														.	.	.	.	.	.	.	.
Template Conservation																																															.	.														.	.	.	.	.	.	.	.
Template Sequence		V	L	P	I	I	R	V	K	D	A	N	E	A	I	S	L	S	N	Q	S	D	Y	G	L	Q	A	S	I	F	T	K	D	T	D	R	A	I	N	I	G	K	H	L	E	V	.	.	G	T	V	H	I	N	A	K	T	E	R	G	P	.	.	.	.	.	.	.	.	D	H	F	P	F	L	G	V	K	K	S	G
Template Known Secondary structure									S	S											S	S			S							S											T	S		S	.	.	S					S	S				S		S	.	.	.	.	.	.	.	.	T	T	S		B				G	G	G
Template Predicted Secondary structure																																															.	.														.	.	.	.	.	.	.	.
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.			.	.	.	.	440	.	.	.	.	.	.	.	.									.	450	.	.	.	.	.	.	.	.	.	460
		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	E	E	L	G	G	L	R	A	V	K	H	Y	M	Q	R	T	A	V
Query Conservation
Alig confidence						.
Template Conservation						.
Template Sequence		L	G	V	Q	.	G	I	K	P	S	L	L	S	M	T	R	E	R	V	T
Template Known Secondary structure			S		B	.	S								T
Template Predicted Secondary structure						.
Template SS confidence
		461	.	.	.		.	.	.	.	.	470	.	.	.	.	.	.	.	.	.