Job Description P77455 Confidence 100.00% Date Thu Jan 5 12:29:26 GMT 2012 Rank 37 Aligned Residues 443 % Identity 21% Template c3pqaA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:lactaldehyde dehydrogenase; PDBTitle: crystal structure of glyceraldehyde-3-phosphate dehydrogenase gapn2 from methanocaldococcus jannaschii dsm 2661 Resolution 1.50 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		R	G	R	S	R	L	I	H	H	A	I	S	G	E	A	L	W	E	V	T	S	E	G	L	D	M	A	A	A	R	Q	F	A	I	E	K	G	A	P	A	L	R	A	M	T	F	I	E	R	A	A	M	L	K	A	V	A	K	H	L	L	S	E	K	E	R	F	Y	A	.	L	S	A	Q	T	G	A	T	R	A
Query Conservation																																																																							.
Alig confidence																																																																							.
Template Conservation
Template Sequence		N	R	E	D	M	D	V	I	N	P	Y	S	L	E	V	I	K	K	I	P	A	L	S	R	E	E	A	K	E	A	I	D	T	A	E	K	Y	K	E	V	M	K	N	L	P	I	T	K	R	Y	N	I	L	M	N	I	A	K	Q	I	K	E	K	K	E	E	L	A	K	I	L	A	I	D	A	G	K	P	I	K
Template Known Secondary structure											T	T	T																									T						T																				T
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	W	V	D	I	E	G	G	I	G	T	L	F	T	Y	A	S	L	G	S	R	E	L	P	D	D	T	L	W	P	E	D	E	L	I	P	L	S	K	E	G	G	F	A	A	R	H	L	L	T	S	K	S	G	V	A	V	H	I	N	A	F	N	F	P	C	W	G	M	L	E	K	L	A	P	T	W	L	G
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	A	R	V	E	V	E	R	S	I	G	T	F	K	L	A	A	F	Y	V	K	E	H	.	.	.	.	.	.	.	.	.	.	.	.	R	D	E	V	I	P	S	D	D	R	L	I	F	T	R	R	E	P	V	G	I	V	G	A	I	T	P	F	N	F	P	L	N	L	S	A	H	K	I	A	P	A	I	A	T
Template Known Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.								T	T											S								S	S	S															T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.													.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200					.	.	.	.	.	.	.	.	.	210	.	.	.				.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.														.	.	.
Query SS confidence																												.	.	.	.														.	.	.
Query Sequence		G	M	P	A	I	I	K	P	A	T	A	T	A	Q	L	T	Q	A	M	V	K	S	I	V	D	S	.	.	.	.	G	L	V	P	E	G	A	I	S	L	I	C	G	.	.	.	S	A	G	D	L	L	D	H	L	D	S	Q	D	V	V	T	F	T	G	S	A	A	T	G	Q	M	L	R	V	Q	P	N	I	V
Query Conservation																												.	.	.	.														.	.	.
Alig confidence																												.	.	.	.		.												.	.	.																															.	.	.	.
Template Conservation																																	.																																													.	.	.	.
Template Sequence		G	N	V	I	V	H	H	P	S	S	K	A	P	L	V	C	I	E	L	A	K	I	I	E	N	A	L	K	K	Y	N	.	V	P	L	G	V	Y	N	L	L	T	G	A	G	E	V	V	G	D	E	I	V	V	N	E	K	V	N	M	I	S	F	T	G	S	S	K	V	G	E	L	I	T	K	K	.	.	.	.
Template Known Secondary structure		T									T	T	S																		T	T	.			G	G	G						S		T	T	T									T	T								S												.	.	.	.
Template Predicted Secondary structure																																	.																																													.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	S	I	P	F	T	M	E	A	D	S	L	N	C	C	V	L	G	E	D	V	T	P	D	Q	P	E	F	A	L	F	I	R	E	V	V	R	E	M	T	T	K	A	G	Q	K	C	T	A	I	R	R	I	I	V	P	Q	A	L	V	N	A	V	S	D	A	L	V	A	R	L	Q	K	V	V	V	G	D	P
Query Conservation
Alig confidence																								.	.	.	.	.
Template Conservation																								.	.	.	.	.
Template Sequence		A	G	F	K	K	I	A	L	E	L	G	G	V	N	P	N	I	V	L	K	D	A	.	.	.	.	.	D	L	N	K	A	V	N	A	L	I	K	G	S	F	I	Y	A	G	Q	V	C	I	S	V	G	M	I	L	V	D	E	S	I	A	D	K	F	I	E	M	F	V	N	K	A	K	V	L	N	V	G	N	P
Template Known Secondary structure				S	S																T	T	S	.	.	.	.	.															G	G	G	G		S	T	T	S								G	G	G														T			B	S		T
Template Predicted Secondary structure																								.	.	.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.						.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	E	G	V	K	M	G	A	L	V	N	A	E	Q	R	A	D	V	Q	E	K	V	N	I	L	L	A	A	G	C	E	I	R	L	G	G	Q	A	D	L	S	A	A	G	A	F	F	P	P	T	L	L	Y	C	P	Q	P	D	E	T	P	A	V	H	A	T	E	A	F	G	P	V	A	T	L	M	P	A	Q
Query Conservation
Alig confidence																																										.	.	.	.										.								.	.
Template Conservation																																										.	.	.	.										.								.	.
Template Sequence		L	D	E	K	T	D	V	G	P	L	I	S	V	E	H	A	E	W	V	E	K	V	V	E	K	A	I	D	E	G	G	K	L	L	L	G	G	K	R	D	.	.	.	.	K	A	L	F	Y	P	T	I	L	.	E	V	D	R	D	N	I	.	.	L	C	K	T	E	T	F	A	P	V	I	P	I	I	R	T	N
Template Known Secondary structure		T	S	T	T		S	B				S																		T	T											.	.	.	.	T	T								.				T	T	S	G	.	.	G	G	T					S	S
Template Predicted Secondary structure																																										.	.	.	.										.								.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.					.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.			.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	R	H	A	L	Q	L	A	C	A	G	G	G	S	L	A	G	T	L	V	T	A	D	P	Q	I	A	R	Q	F	I	A	D	A	A	R	T	H	G	R	I	Q	I	L	N	E	E	S	A	K	E	S	T	G	H	G	S	P	L	P	Q	L	V	H	G	G	P	G	R	A	G	G	G	E	E	L	G	G	L
Query Conservation
Alig confidence			.																																				.	.														.	.	.	.	.	.	.	.																	.
Template Conservation			.																																				.	.														.	.	.	.	.	.	.	.																	.
Template Sequence		E	.	E	E	M	I	D	I	A	N	S	T	E	Y	G	L	H	S	A	I	F	T	N	D	I	N	K	S	L	K	F	A	E	N	L	E	F	.	.	G	G	V	V	I	N	D	S	S	L	F	R	Q	.	.	.	.	.	.	.	.	D	N	M	P	F	G	G	V	K	K	S	G	L	G	R	E	.	G	V	K
Template Known Secondary structure			.								T		S	S			S							S												S		S	.	.	S					S	S		T	T				.	.	.	.	.	.	.	.	T	T	S		B			S	G	G	G			S		B	.	S
Template Predicted Secondary structure			.																																				.	.														.	.	.	.	.	.	.	.																	.
Template SS confidence
		381		.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.			.	.	.	420	.	.	.	.	.	.	.	.	.									430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.		.	.	.
		488	.	490	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	V	K	H	Y	M	Q	R	T	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	A	M	E	E	M	S	N	I	K	T	I
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		449	450	.	.	.	.	.	.	.	.	.	460