Job Description P77455 Confidence 60.62% Date Thu Jan 5 12:29:26 GMT 2012 Rank 160 Aligned Residues 47 % Identity 13% Template c3mu3A_ PDB info PDB header:immune system Chain: A: PDB Molecule:protein md-1; PDBTitle: crystal structure of chicken md-1 complexed with lipid iva Resolution 2.40 Å

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		617	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	K	P	G	D	T	I	Q	V	R	L	T	C	K	R	K	T	L	K	K	Q	R	S	A	E	E	K	P	T	G	V	V	E	W	A	V	E	V	F	N	Q	H	Q	T	P	V	A	L	Y	S	I	L	T
Query Conservation
Alig confidence																.	.										.	.	.	.	.
Template Conservation																.	.										.	.	.	.	.
Template Sequence		G	K	K	K	G	E	H	L	Y	Y	E	G	P	I	.	.	T	L	G	I	K	E	I	P	Q	.	.	.	.	.	R	D	Y	T	I	T	A	R	L	T	N	E	D	R	A	T	V	A	C	A	D	F	T	V
Template Known Secondary structure		T			T	T										.	.			S	S	S	S				.	.	.	.	.												T	T	S
Template Predicted Secondary structure																.	.										.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.			.	.	.	.	.	.	.	.	130						.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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