Job Description P77455 Confidence 68.87% Date Thu Jan 5 12:29:26 GMT 2012 Rank 158 Aligned Residues 48 % Identity 15% Template c3m7oB_ PDB info PDB header:immune system Chain: B: PDB Molecule:lymphocyte antigen 86; PDBTitle: crystal structure of mouse md-1 in complex with phosphatidylcholine Resolution 1.65 Å

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		617	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	K	P	G	D	T	I	Q	V	R	L	T	C	K	R	K	T	L	K	K	Q	R	S	A	E	E	K	P	T	G	V	V	E	W	A	V	E	V	F	N	Q	H	Q	T	P	V	A	L	Y	S	I	L	T	L
Query Conservation
Alig confidence																.	.										.	.	.	.	.
Template Conservation																.	.										.	.	.	.	.
Template Sequence		G	R	R	K	G	E	Q	I	Y	Y	A	G	P	V	.	.	N	N	P	G	L	D	V	P	Q	.	.	.	.	.	G	E	Y	Q	L	L	L	E	L	Y	N	E	N	R	A	T	V	A	C	A	N	A	T	V	T
Template Known Secondary structure		T			T	T										.	.									S	.	.	.	.	.												T	T
Template Predicted Secondary structure																.	.										.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.						.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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