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Job DescriptionP77455
Confidence100.00%DateThu Jan 5 12:29:26 GMT 2012
Rank25Aligned Residues464
% Identity25%Templatec3b4wA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:aldehyde dehydrogenase; PDBTitle: crystal structure of mycobacterium tuberculosis aldehyde dehydrogenase2 complexed with nad+
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10..... ....20.........30.........40.........50..... ....60.........70........
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Query Sequence  QQLASFLSGTWQSG. RGRSRLIHHAISGEALWEVTSEGLDMAAARQFAIEKGAPA. . LRAMTFIERAAMLKAVAKHLLSE
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Template Sequence  EYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAER
Template Known Secondary structure 
SSTT

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SSTTTS
T
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   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   7980.... .....90........ .100.........110.........120.........130.........140.........150......
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Query Sequence  KERFYA. LSAQTGATRADSWV. DIEGGIGTLFTYASLGSRELPDDTLWPEDELIPLSKEGGFAARHLLTSKSGVAVHINA
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Template Sequence  KDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQ. . . . . . . . . . . SIVSREPVGVVGAIVA
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TTTT
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   87..90.........100.........110.........120.........130......... 140.........150.....
 
   157..160.........170.........180.........190.........200.........210... ......220.........230....
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Query Sequence  FNFPCWGMLEKLAPTWLGGMPAIIKPATATAQLTQAMVKSIVDSGLVPEGAISLICG. . SAGDLLDHLDSQDVVTFTGSA
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Template Sequence  WNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVG. LPEGVLSVVPGGIETGQALTSNPDIDMFTFTGSS
Template Known Secondary structure  SSSTT

BTTS
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   156...160.........170.........180.........190.........200 .........210.........220.........230....
 
   235....240.........250.........260.........270.........280.........290.........300.........310....
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Query Sequence  ATGQMLRVQPNIVAKSIPFTMEADSLNCCVLGEDVTPDQPEFALFIREVVREMTTKAGQKCTAIRRIIVPQALVNAVSDA
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Template Sequence  AVGREVGRRAA. . EMLKPCTLELGGKSAAIILEDV. . . . . DLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAA
Template Known Secondary structure  ..TT






TT
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GGGG

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GGG
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   235....240..... ....250.........260....... ..270.........280.........290.........300.......
 
   315....320.........330.........340.........350.........360........ .370.........380.........390...
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Query Sequence  LVARLQKVVVGDPAQEGVKMGALVNAEQRADVQEKVNILLAAGCEIRLGGQADL. SAAGAFFPPTLLYCPQPDETPAVHA
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Template Sequence  VTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMT. . IAQ
Template Known Secondary structure  S
B

TT
TT

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S
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S

TT
TTS




S

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   308.310.........320.........330.........340.........350.........360.........370.........380.. ...
 
   394.....400.........410.........420.........430.........440.........450.........460.........470...
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Query Sequence  TEAFGPVATLMPAQNQRHALQLACAGGGSLAGTLVTADPQIARQFIADAARTHGRIQILNEESAKESTGHGSPLPQLVHG
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Template Sequence  EEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRT. . GTYGINW. . . . . . . . . . YAFDPGSPFG
Template Known Secondary structure  S


SSSS
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TTS
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   386...390.........400.........410.........420.........430...... ...440... ......450...
 
   474.....480.........490.........
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Query Sequence  GPGRAGGGEELGGLRAVKHYMQRTAV
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Template Sequence  GYKNSGIGRE. NGPEGVEHFTQQKSV
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SGGGS
B.STT
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   454.....460... ......470........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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