Job Description P77455 Confidence 100.00% Date Thu Jan 5 12:29:26 GMT 2012 Rank 13 Aligned Residues 468 % Identity 24% Template c2ve5H_ PDB info PDB header:oxidoreductase Chain: H: PDB Molecule:betaine aldehyde dehydrogenase; PDBTitle: crystallographic structure of betaine aldehyde2 dehydrogenase from pseudomonas aeruginosa Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		M	Q	Q	L	A	S	F	L	S	G	T	W	Q	S	G	.	R	G	R	S	R	L	I	H	H	A	I	S	G	E	A	L	W	E	V	T	S	E	G	L	D	M	A	A	A	R	Q	F	A	I	E	K	G	A	P	A	L	R	A	M	T	F	I	E	R	A	A	M	L	K	A	V	A	K	H	L	L	S	E	K
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		F	E	E	Q	K	L	Y	I	G	G	R	Y	V	E	A	S	S	G	A	T	F	E	T	I	N	P	A	N	G	E	V	L	A	K	V	Q	R	A	S	R	E	D	V	E	R	A	V	Q	S	A	V	E	G	Q	K	V	W	A	A	M	T	A	M	Q	R	S	R	I	L	R	R	A	V	D	I	L	R	E	R	N
Template Known Secondary structure		S			B					S	S	S					S	S									T	T	S																															T	S																			T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure							.															.
Query SS confidence							.															.
Query Sequence		E	R	F	Y	A	.	L	S	A	Q	T	G	A	T	R	A	D	S	W	V	.	D	I	E	G	G	I	G	T	L	F	T	Y	A	S	L	G	S	R	E	L	P	D	D	T	L	W	P	E	D	E	L	I	P	L	S	K	E	G	G	F	A	A	R	H	L	L	T	S	K	S	G	V	A	V	H	I	N	A	F
Query Conservation							.															.
Alig confidence							.															.																																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	E	L	A	A	L	E	T	L	D	T	G	K	P	L	A	E	T	R	S	V	D	I	V	T	G	A	D	V	L	E	Y	Y	A	G	L	V	P	A	I	E	G	E	Q	I	P	L	R	E	T	S	F	.	.	.	.	.	.	.	.	.	.	.	V	Y	T	R	R	E	P	L	G	V	V	A	G	I	G	A	W
Template Known Secondary structure																				T	T	T														T	T	G	G	G										T	T			.	.	.	.	.	.	.	.	.	.	.									S								S
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.												.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.				.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																										.	.	.
Query SS confidence																																																										.	.	.
Query Sequence		N	F	P	C	W	G	M	L	E	K	L	A	P	T	W	L	G	G	M	P	A	I	I	K	P	A	T	A	T	A	Q	L	T	Q	A	M	V	K	S	I	V	D	S	G	L	V	P	E	G	A	I	S	L	I	C	G	.	.	.	S	A	G	D	L	L	D	H	L	D	S	Q	D	V	V	T	F	T	G	S	A
Query Conservation																																																										.	.	.
Alig confidence																																														.												.	.	.
Template Conservation																																														.
Template Sequence		N	Y	P	V	Q	I	A	L	W	K	S	A	P	A	L	A	A	G	N	A	M	I	F	K	P	S	E	V	T	P	L	T	A	L	K	L	A	E	I	Y	T	E	A	G	.	V	P	D	G	V	F	N	V	L	T	G	S	G	R	E	V	G	Q	W	L	T	E	H	P	L	I	E	K	I	S	F	T	G	G	T
Template Known Secondary structure		S	S															T	T									S	S															T	T	.			T	T	T						S		T	T	T									T	T								S
Template Predicted Secondary structure																																														.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	G	Q	M	L	R	V	Q	P	N	I	V	A	K	S	I	P	F	T	M	E	A	D	S	L	N	C	C	V	L	G	E	D	V	T	P	D	Q	P	E	F	A	L	F	I	R	E	V	V	R	E	M	T	T	K	A	G	Q	K	C	T	A	I	R	R	I	I	V	P	Q	A	L	V	N	A	V	S	D	A
Query Conservation
Alig confidence											.																										.	.	.	.	.
Template Conservation											.																										.	.	.	.	.
Template Sequence		S	T	G	K	K	V	M	A	S	.	A	S	S	S	S	L	K	E	V	T	M	E	L	G	G	K	S	P	L	I	I	F	P	D	A	.	.	.	.	.	D	L	D	R	A	A	D	I	A	V	M	A	N	F	F	S	S	G	Q	V	C	T	N	G	T	R	V	F	I	H	R	S	Q	Q	A	R	F	E	A	K
Template Known Secondary structure											.																							T	T	S	.	.	.	.	.															G	G	G	G			T	T									G	G	G
Template Predicted Secondary structure											.																										.	.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.						.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.				.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																																																						.	.	.
Query SS confidence																																																						.	.	.
Query Sequence		L	V	A	R	L	Q	K	V	V	V	G	D	P	A	Q	E	G	V	K	M	G	A	L	V	N	A	E	Q	R	A	D	V	Q	E	K	V	N	I	L	L	A	A	G	C	E	I	R	L	G	G	Q	A	.	.	.	D	L	S	A	A	G	A	F	F	P	P	T	L	L	Y	C	P	Q	P	D	E	T	P	A	V
Query Conservation																																																						.	.	.
Alig confidence																																																						.	.	.																							.	.
Template Conservation																																																																															.	.
Template Sequence		V	L	E	R	V	Q	R	I	R	L	G	D	P	Q	D	E	N	T	N	F	G	P	L	V	S	F	P	H	M	E	S	V	L	G	Y	I	E	S	G	K	A	Q	K	A	R	L	L	C	G	G	E	R	V	T	D	G	A	F	G	K	G	A	Y	V	A	P	T	V	F	T	D	C	R	D	D	M	T	.	.	I
Template Known Secondary structure							T	T			B			T	T	S	T	T		S	B				S																		T	T								S				S	G	G	G	G	G	T	T									S			T	T	S		.	.
Template Predicted Secondary structure																																																																															.	.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.			.
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	T	E	A	F	G	P	V	A	T	L	M	P	A	Q	N	Q	R	H	A	L	Q	L	A	C	A	G	G	G	S	L	A	G	T	L	V	T	A	D	P	Q	I	A	R	Q	F	I	A	D	A	A	R	T	H	G	R	I	Q	I	L	N	E	E	S	A	K	E	S	T	G	H	G	S	P	L	P	Q	L	V
Query Conservation
Alig confidence																																																							.	.								.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.								.	.	.	.	.	.	.	.	.
Template Sequence		V	R	E	E	I	F	G	P	V	M	S	I	L	V	Y	D	D	E	D	E	A	I	R	R	A	N	D	T	E	Y	G	L	A	A	G	V	V	T	Q	D	L	A	R	A	H	R	A	I	H	R	L	E	A	.	.	G	I	C	W	I	N	T	.	.	.	.	.	.	.	.	.	W	G	E	S	P	A	E	M	P
Template Known Secondary structure				S				S	S								S												S	S			S							S															.	.	S					S		.	.	.	.	.	.	.	.	.						T	T	S
Template Predicted Secondary structure																																																							.	.								.	.	.	.	.	.	.	.	.
Template SS confidence
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.			.	.	.	440	.	.	.										.	.	.	.	.	.	450	.	.
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	G	P	G	R	A	G	G	G	E	E	L	G	G	L	R	A	V	K	H	Y	M	Q	R	T	A	V	Q
Query Conservation
Alig confidence														.
Template Conservation														.
Template Sequence		V	G	G	Y	K	Q	S	G	V	G	R	E	.	N	G	L	T	T	L	A	H	Y	T	R	I	K	S	V	Q
Template Known Secondary structure		B			S	G	G	G			S		B	.	S							T	T
Template Predicted Secondary structure														.
Template SS confidence
		453	.	.	.	.	.	.	460	.	.	.	.		.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480