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Job DescriptionP77455
Confidence100.00%DateThu Jan 5 12:29:26 GMT 2012
Rank12Aligned Residues469
% Identity18%Templatec2o2qA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:formyltetrahydrofolate dehydrogenase; PDBTitle: crystal structure of the c-terminal domain of rat2 10'formyltetrahydrofolate dehydrogenase in complex with nadp
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  QQLASFLSGTWQSG. RGRSRLIHHAISGEALWEVTSEGLDMAAARQFAIEKGAPA. . LRAMTFIERAAMLKAVAKHLLSE
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Template Sequence  MPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQH
Template Known Secondary structure 

STT

GGG

TTT




TSGGGTS
T
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   420.........430.........440.........450.........460.........470.........480.........490.........
 
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Query Sequence  KERFYA. LSAQTGATRADS. WVDIEGGIGTLFTYASLGSRELPDDTLWPEDELIPLSKEGGFAARHLLTSKSGVAVHINA
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Template Sequence  QEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDK. . . . . . . IQGATIPINQARPNRNLTLTKKEPVGVCGIVIP
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   500.........510.........520.........530......... 540.........550.........560.........570..
 
   157..160.........170.........180.........190.........200.........210... ......220.........230...
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Query Sequence  FNFPCWGMLEKLAPTWLGGMPAIIKPATATAQLTQAMVKSIVDSGLVPEGAISLICG. . . SAGDLLDHLDSQDVVTFTGS
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Template Sequence  WNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAG. IPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGS
Template Known Secondary structure  SSSTT


TT

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   573......580.........590.........600.........610....... ..620.........630.........640.........650.
 
   234.....240.........250.........260.........270.........280.........290.........300.........310...
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Query Sequence  AATGQMLRVQPNIVAKSIPFTMEADSLNCCVLGEDVTPDQPEFALFIREVVREMTTKAGQKCTAIRRIIVPQALVNAVSD
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Template Sequence  TEVGKHIMKS. CALSNVKKVSLELGGKSPLIIFADC. . . . . DLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQ
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TTS.....
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   652.......660. ........670.........680...... ...690.........700.........710.........720.....
 
   314.....320.........330.........340.........350.........360.........370.........380.........390...
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Query Sequence  ALVARLQKVVVGDPAQEGVKMGALVNAEQRADVQEKVNILLAAGCEIRLGGQADLSAAGAFFPPTLLYCPQPDETPAVHA
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Template Sequence  KVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRP. GFFFQPTVFTDVEDHMY. . IAK
Template Known Secondary structure  T

BS
TTSTT

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SSTT


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   726...730.........740.........750.........760.........770.........780.. .......790......... 800..
 
   394.....400...... ...410.........420.........430.........440.........450.........460.........470.
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Query Sequence  TEAFGPVATLMPA. . QNQRHALQLACAGGGSLAGTLVTADPQIARQFIADAARTHGRIQILNEESAKESTGHGSPLPQLV
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Template Sequence  EESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQA. . GTVFINTYNKTD. . . . . . . . . VAAP
Template Known Secondary structure  S


SS
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   803......810.........820.........830.........840.........850..... ....860....... ..870.
 
   472.......480.........490.........
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Query Sequence  HGGPGRAGGGEELGGLRAVKHYMQRTAV
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Template Sequence  FGGFKQSGFGKD. LGEAALNEYLRIKTV
Template Known Secondary structure  B

SGGG

B.SGGG
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   872.......880... ......890........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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