Job Description P77455 Confidence 24.09% Date Thu Jan 5 12:29:26 GMT 2012 Rank 180 Aligned Residues 53 % Identity 13% Template c2e59A_ PDB info PDB header:lipid binding protein Chain: A: PDB Molecule:lymphocyte antigen 96; PDBTitle: crystal structure of human md-2 in complex with lipid iva Resolution 2.21 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		617	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	K	P	G	D	T	I	Q	V	R	L	T	C	K	R	K	T	L	K	K	Q	R	S	A	E	E	K	P	T	G	V	V	E	W	A	V	E	V	F	N	Q	H	Q	T	P	V	A	L	Y	S	I	L	T	L	V	A	R	Q	H
Query Conservation
Alig confidence																.	.										.	.	.	.	.
Template Conservation																.	.										.	.	.	.	.
Template Sequence		R	A	L	K	G	E	T	V	N	T	T	I	S	F	.	.	S	F	K	G	I	K	F	S	K	.	.	.	.	.	G	K	Y	K	C	V	V	E	A	I	S	G	S	P	E	E	M	L	F	C	L	E	F	V	I	L	H	Q	P	N
Template Known Secondary structure		G			T	T										.	.						S	S			.	.	.	.	.	S											T	T	T	T														T	T
Template Predicted Secondary structure																.	.										.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.			120	.	.	.	.	.	.	.	.						.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions