|   |
41 | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
. | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
100 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
Query Sequence |   |
M | A | A | A | R | Q | F | A | I | E | K | G | A | P | A | L | R | A | M | T | F | I | E | R | A | A | M | L | K | A | V | A | K | H | L | L | S | E | K | E | R | F | Y | A | . |
L | S | A | Q | T | G | A | T | R | A | D | S | W | V | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | E | G | G | I | G | T |
Query Conservation |   |
  |   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |
|
|   | . |
|   |   |
|   |
|
|   |   |   |   |
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |
|   |
|   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
Template Sequence |   |
S | S | Q | Q | I | A | K | N | A | R | K | A | G | N | I | L | K | T | I | S | N | E | G | R | S | D | I | L | Y | K | I | H | D | A | L | K | A | N | A | H | A | I | E | E | A | N | K | I | D | L | A | V | A | K | E | T | G | L | A | D | S | L | L | K | R | L | D | L | F | K | G | D | K | F | E | V | X | L | Q | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
| S |  |  |  |  | T | T |
| T | T | S | T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
  |
  |   |
107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | F | T | Y | A | S | L | G | S | R | E | L | P | D | D | T | L | W | P | E | D | E | L | I | P | L | S | K | E | G | G | F | A | A | R | H | L | L | T | S | K | S | G | V | A | V | H | I | N | A | F | N | F | P | C | W | G | M | L | E | K | L | A | P | T | W | L | G | G | M | P | A | I | I | K | P | A | T | A | T |
Query Conservation |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|   |   |
|   |
|
|
|
|
|
|   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |
|   |   |   |   |   |   |
| . | . |   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|
|
|
|
|
|   |   |
|
Template Sequence |   |
I | K | D | V | A | E | L | E | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
P | V | G | K | V | K | X | A | R | E | L | D | D | G | L | T | L | Y | Q | V | T | A | P | V | G | V | L | L | V | I | F | E | S | R | P | E | V | . |
. |
I | A | N | I | T | A | L | S | I | K | S | G | N | A | A | I | L | K | G | G | K | E | S |
Template Known Secondary structure |   |
 |  |  |  |  |  | S |
|
| . | . | . | . | . | . | . | . | . | S | S | S |
|  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
| G | G | G | . | . | T | T |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
| G | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
83 | . | . | . | . | . | . | 90 | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
|
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . |
  |
  |   |
187 | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Q | L | T | Q | A | M | V | K | S | I | V | D | S | . |
. |
. |
. |
. |
. |
. |
. |
G | L | V | P | E | G | A | I | S | L | I | C | G | S | A | G | D | L | L | D | H | L | D | S | Q | D | V | V | T | F | T | G | S | A | A | T | G | Q | M | L | R | V | Q | P | N | I | V | A | K | S | I | P | F | T | M | E | A | D |
Query Conservation |   |
|   |   |   |   |   |
|   |   |   |   |   |
|
| . | . | . | . | . | . | . | . |
|   |
|
|   |
|
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |   |
|   |   |
|   |   |   |   |
|
|
|   |   |   |   |   |   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |
|
|   |
|
|
|   |   |   |   |   |   |   |
| . |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|   |
|
|
|
|   |   |   |
|   |   |
|   |   |   |
|   | . | . | . | . | . |   |
|   |   |   |
|
|
|
Template Sequence |   |
V | N | T | F | R | E | X | A | K | I | V | N | D | T | I | A | Q | F | Q | S | E | T | G | . |
V | P | V | G | S | V | Q | L | I | E | T | D | V | S | D | L | L | D | Q | D | E | Y | I | D | L | V | V | P | R | G | S | N | A | L | V | R | K | I | K | D | T | T | K | . |
. |
. |
. |
. |
I | P | V | L | G | H | A | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |
| . |
|
| T | T | S |  |  |  |
|
|
|
|  |  |  |  | T | T |
| T | T | T |
|
|  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  | T |
| S | . | . | . | . | . | S |
| B | T | T |
|
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . |
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
152 | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | |
. | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 220 | . | . | . | . | . |
  |
  |   |
259 | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | L | N | C | C | V | L | G | E | D | V | T | P | D | Q | P | E | F | A | L | F | I | R | E | V | V | R | E | M | T | T | K | A | G | Q | K | C | T | A | I | R | R | I | I | V | P | Q | A | L | V | N | A | V | S | D | A | L | V | A | R | L | Q | K | V | V | V | G | D | P | A | Q | E | G | V | K | M | G | A | L | V |
Query Conservation |   |
|
|
|
|   |
|
|   |   |
|
|   |   |   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |
|   |   |
|
|   |
|   |   |   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|
|   |
|   |
|   |   |
|   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|   |   |
|   |
|
|   |   |
|
| . | . | . | . | . |
|
|   |   |
|   |   |   |
|
|   |   |   |   |   |
|
|   |   |   |   | . | . | . | . | . | . |
|
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
G | I | C | S | I | Y | L | D | E | D | A | . |
. |
. |
. |
. |
D | L | I | K | A | K | R | I | S | L | D | A | K | T | N | N | A | X | E | T | L | . |
. |
. |
. |
. |
. |
L | I | N | P | K | F | S | K | W | W | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
|  |  |  |  |  |  |
| T | T |
| . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . | . | . | . | . |  |  |
| T | T | S | T | T | T |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
|
|
|
| . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |  | . | . | . | . | . | . |  |  |
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
228 | . | 230 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
260 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |
  |   |
339 | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | A | E | Q | R | A | D | V | Q | E | K | V | N | I | L | L | A | A | G | C | E | I | R | L | G | G | Q | A | D | L | S | A | A | G | A | F | F | P | P | T | L | L | Y | C | P | Q | P | D | E | T | P | A | V | H | A | T | E | A | F | G | P | V | A | T | L | M | P | A | Q | N | Q | R | H | A | L | Q | L | A | C | A |
Query Conservation |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |
|   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |
|
|
|
|   |
|
|
|   |
Alig confidence |   |
. | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |
|   |   |   | . | . |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |
|   |   |
|   |   |   |
|
|
|
|   |   |   |
|   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
E | V | L | E | N | L | T | L | E | G | G | V | T | I | H | A | T | K | D | L | K | T | . |
. |
. |
A | Y | F | D | K | L | N | E | L | . |
. |
G | K | L | T | E | A | I | Q | C | K | T | V | D | A | D | S | L | D | L | A | A | K | F | V | T | S | T | E | S | A | I | Q | H | I | N | T |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  | . | . | T |
|
|
|  |  |  |  | T | T |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
| . | . | . |
|
|  |  |
|
|  |  |  | . | . |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
275 | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | |
|
|
. | . | . | 300 | . | . | . | . | . | |
|
. | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . |
  |
  |   |
419 | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | G | G | S | L | A | G | T | L | V | T | A | D | P | Q | I | A | R | Q | F | I | A | D | A | A | R | T | H | G | R | I | Q | I | L | N | E | E | S | A | K | E | S | T | G | H | G | S | P | L | P | Q | L | V | H | G | G | P | G |
Query Conservation |   |
  |   |
|
|
|   |
|
|
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |
|
|   |   |   |   |   |   |
|   |   |
|
|
|   |
|   |
|   |   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|   |
| . | . |
|   |
|   |
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |
|
|   |   |
Template Sequence |   |
H | S | S | R | H | T | D | A | I | V | T | E | N | K | A | N | A | E | K | F | X | K | G | V | D | S | . |
. |
S | G | V | Y | W | N | A | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | R | F | A | D | G | G | L | D |
Template Known Secondary structure |   |
S |
| S | S |
|
|  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | S | S |  |  |  | S | S |
| . | . | . | . | . | . | . | . | . | . | . | . | . | G | G | G | G |
|
|
|
| G |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . | . |
|  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
352 | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | |
|
. | . | 380 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 390 | . | . | . | . |
  |