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23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
V | I | N | A | L | K | K | V | G | I | E | I | D | I | V | A | G | C | S | I | G | S | L | V | G | A | A | Y | A | C | D | R | L | . |
S | A | L | E | D | W | V | T | S | F | S | Y | W | D | V | L | R | L | M | D | L | S | W | Q | R | G | G | L | L | R | G | E | R | V | F | N | Q | Y | R | E | I | M | P | E | T | E |
Query Conservation |   |
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|   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | S | A | A | A | L | G | T | G | F | T | P | G | A | V | A | G | H | S | V | G | E | I | T | A | A | V | F | A | G | V | L | D | D | T | A | A | L | S | L | V | R | R | R | G | L | A | M | A | E | A | A | A | V | T | V | A | G | A | F | H | T | R | H | M | A | P | A | V | D | K | L | A | E | A | A | K | A | L | T |
Template Known Secondary structure |   |
 |  |  |  |  |  | T |
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| S |  |  |  |  | S | T | T |  |  |  |  |  |  |  |  | T | T | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
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| S |
| T | T | S | G | G | G |  |  |  |  |  |  |  |  |  |  |  | T | T |
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Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
  |
  |   |
102 | . | . | . | . | . | . | . | 110 |
Predicted Secondary structure |   |
 |  |  |
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|  |  |
Query SS confidence |   |
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Query Sequence |   |
I | E | N | C | S | R | R | F | A |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |
Alig confidence |   |
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|
Template Conservation |   |
  |   |   |
|   |   |
|   |   |
Template Sequence |   |
P | A | D | P | K | V | T | Y | V |
Template Known Secondary structure |   |
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| S | S |  |  | B |
Template Predicted Secondary structure |   |
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|  |  |
Template SS confidence |   |
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  |   |
221 | . | . | . | . | . | . | . | . |
  |