 |
Job Description | P77399 | Confidence | 99.49% | Date | Thu Jan 5 12:28:38 GMT 2012 |
Rank | 126 | Aligned Residues | 124 |
% Identity | 18% | Template | d1i10a1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| LDH N-terminal domain-like
|
Resolution | 2.30 |
|
 |
  |   |
307 | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | |
|
. | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | L | N | S | V | G | I | L | G | G | G | L | M | G | G | G | I | A | Y | V | T | A | C | K | A | G | I | . |
. |
P | V | R | I | K | D | I | N | P | Q | G | I | N | H | A | L | K | Y | S | W | D | Q | L | E | G | K | V | R | R | R | H | L | K | A | S | E | R | D | K | Q | L | A | L | I | S | G | T | T | D | Y | R |
Query Conservation |   |
  |
|   |   |
|   |
|
|
|
|
|   |
|
|   |
|
|
|   |   |   |
|   |   |
|
|   | . | . |   |
|   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |   |   |
|   | . |   |
|   |   |   |
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
P | Q | N | K | I | T | V | V | G | V | G | A | V | G | M | A | C | A | I | S | I | L | M | . |
K | D | L | A | D | E | L | A | L | V | D | V | I | E | D | K | L | K | G | E | M | M | D | L | Q | H | G | S | L | F | L | R | T | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | I | V | S | G | K | D | Y | N |
Template Known Secondary structure |   |
| S | S |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | . | T | T |
|
| S |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | G | G | G |
| S |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
| S | S | G | G |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | |
. | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 80 | . | . | . |
  |
  |   |
385 | . | . | . | . | 390 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | |
. | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | |
. | 440 | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  | . |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Query Sequence |   |
G | F | A | H | R | D | L | I | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | A | V | F | E | N | L | E | L | K | Q | Q | M | V | A | E | V | E | Q | N | C | A | A | H | T | I | F | . |
A | S | N | T | S | S | L | P | I | G | D | I | A | A | H | A | T | R | . |
P | E | Q | V | I | G |
Query Conservation |   |
  |
|   |   |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|   |
|   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|
| . |
|
|
|
|
|   |
|   |
|   |   |
|
|   |   |   |   |   | . |
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |
|
|   |
|   |   |
|
|
|
|
Template Sequence |   |
V | T | A | N | S | K | L | V | I | I | T | A | G | A | R | Q | Q | E | G | E | S | R | L | N | L | V | Q | R | N | V | N | I | F | K | F | I | I | P | N | V | V | K | Y | S | P | N | C | K | L | L | I | V | S | N | P | V | D | I | L | T | Y | V | A | W | K | I | S | G | F | P | K | N | R | V | I | G |
Template Known Secondary structure |   |
G | G | T | T |
| S |  |  |  |  |
|
| S |
|
|
|
| T | T |
|
| G | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |
| S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| G | G | G |  |  |
|
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|